EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0026878 (Gene tree)
Gene ID: -
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Alc1|Snf2p
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 52316 bases
Position: chr3:97698677-97750992
Accession: 1915308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0061567	ResIII	PF04851.15	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0061567	-	3008	XM_017319700	MGP_WSBEiJ_P0061567	900 (aa)	XP_017175189	Q9CXF7
MGP_WSBEiJ_T0061570	-	2941	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061569	-	501	-	-	- (aa)	-	-
MGP_WSBEiJ_T0061568	-	2679	-	MGP_WSBEiJ_P0061568	892 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0026878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0026878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0026878	Chd1l	62	43.826	MGP_WSBEiJ_G0034792	Smarca1	75	42.930
MGP_WSBEiJ_G0026878	Chd1l	54	30.171	MGP_WSBEiJ_G0027827	Rad54l	69	30.361
MGP_WSBEiJ_G0026878	Chd1l	54	39.054	MGP_WSBEiJ_G0024363	Hells	69	39.054
MGP_WSBEiJ_G0026878	Chd1l	51	35.135	MGP_WSBEiJ_G0030001	Smarcad1	50	35.135
MGP_WSBEiJ_G0026878	Chd1l	64	42.289	MGP_WSBEiJ_G0032948	Smarca5	53	42.546
MGP_WSBEiJ_G0026878	Chd1l	50	30.528	MGP_WSBEiJ_G0027286	Rad54b	56	30.528
MGP_WSBEiJ_G0026878	Chd1l	50	32.657	MGP_WSBEiJ_G0019995	Ercc6l2	81	30.021