EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027222 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 26535 bases
Position: chr3:155065872-155092406
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0063217	KH_1	PF00013.29	7e-70	1	4
MGP_WSBEiJ_P0063217	KH_1	PF00013.29	7e-70	2	4
MGP_WSBEiJ_P0063217	KH_1	PF00013.29	7e-70	3	4
MGP_WSBEiJ_P0063217	KH_1	PF00013.29	7e-70	4	4
MGP_WSBEiJ_P0063214	KH_1	PF00013.29	2.2e-69	1	4
MGP_WSBEiJ_P0063214	KH_1	PF00013.29	2.2e-69	2	4
MGP_WSBEiJ_P0063214	KH_1	PF00013.29	2.2e-69	3	4
MGP_WSBEiJ_P0063214	KH_1	PF00013.29	2.2e-69	4	4
MGP_WSBEiJ_P0063220	KH_1	PF00013.29	2.2e-69	1	4
MGP_WSBEiJ_P0063220	KH_1	PF00013.29	2.2e-69	2	4
MGP_WSBEiJ_P0063220	KH_1	PF00013.29	2.2e-69	3	4
MGP_WSBEiJ_P0063220	KH_1	PF00013.29	2.2e-69	4	4
MGP_WSBEiJ_P0063218	KH_1	PF00013.29	2.3e-69	1	4
MGP_WSBEiJ_P0063218	KH_1	PF00013.29	2.3e-69	2	4
MGP_WSBEiJ_P0063218	KH_1	PF00013.29	2.3e-69	3	4
MGP_WSBEiJ_P0063218	KH_1	PF00013.29	2.3e-69	4	4
MGP_WSBEiJ_P0063216	KH_1	PF00013.29	2.4e-69	1	4
MGP_WSBEiJ_P0063216	KH_1	PF00013.29	2.4e-69	2	4
MGP_WSBEiJ_P0063216	KH_1	PF00013.29	2.4e-69	3	4
MGP_WSBEiJ_P0063216	KH_1	PF00013.29	2.4e-69	4	4
MGP_WSBEiJ_P0063215	KH_1	PF00013.29	7.5e-38	1	2
MGP_WSBEiJ_P0063215	KH_1	PF00013.29	7.5e-38	2	2
MGP_WSBEiJ_P0063224	KH_1	PF00013.29	1.1e-16	1	1
MGP_WSBEiJ_P0063217	KH_2	PF07650.17	1.3e-22	1	2
MGP_WSBEiJ_P0063217	KH_2	PF07650.17	1.3e-22	2	2
MGP_WSBEiJ_P0063220	KH_2	PF07650.17	3.3e-22	1	2
MGP_WSBEiJ_P0063220	KH_2	PF07650.17	3.3e-22	2	2
MGP_WSBEiJ_P0063218	KH_2	PF07650.17	3.5e-22	1	2
MGP_WSBEiJ_P0063218	KH_2	PF07650.17	3.5e-22	2	2
MGP_WSBEiJ_P0063216	KH_2	PF07650.17	3.6e-22	1	2
MGP_WSBEiJ_P0063216	KH_2	PF07650.17	3.6e-22	2	2
MGP_WSBEiJ_P0063214	KH_2	PF07650.17	3.6e-22	1	2
MGP_WSBEiJ_P0063214	KH_2	PF07650.17	3.6e-22	2	2
MGP_WSBEiJ_P0063215	KH_2	PF07650.17	3.8e-10	1	1
MGP_WSBEiJ_P0063224	KH_2	PF07650.17	5.2e-06	1	1
MGP_WSBEiJ_P0063228	DUF1897	PF09005.10	1.7e-12	1	2
MGP_WSBEiJ_P0063228	DUF1897	PF09005.10	1.7e-12	2	2
MGP_WSBEiJ_P0063226	DUF1897	PF09005.10	2.1e-12	1	2
MGP_WSBEiJ_P0063226	DUF1897	PF09005.10	2.1e-12	2	2
MGP_WSBEiJ_P0063214	DUF1897	PF09005.10	2.4e-11	1	2
MGP_WSBEiJ_P0063214	DUF1897	PF09005.10	2.4e-11	2	2
MGP_WSBEiJ_P0063220	DUF1897	PF09005.10	2.4e-11	1	2
MGP_WSBEiJ_P0063220	DUF1897	PF09005.10	2.4e-11	2	2
MGP_WSBEiJ_P0063218	DUF1897	PF09005.10	2.5e-11	1	2
MGP_WSBEiJ_P0063218	DUF1897	PF09005.10	2.5e-11	2	2
MGP_WSBEiJ_P0063216	DUF1897	PF09005.10	2.6e-11	1	2
MGP_WSBEiJ_P0063216	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0063228	-	846	-	MGP_WSBEiJ_P0063228	156 (aa)	-	-
MGP_WSBEiJ_T0063221	-	4885	-	MGP_WSBEiJ_P0063221	700 (aa)	-	-
MGP_WSBEiJ_T0063217	-	3162	-	MGP_WSBEiJ_P0063217	523 (aa)	-	-
MGP_WSBEiJ_T0063216	-	2551	-	MGP_WSBEiJ_P0063216	654 (aa)	-	-
MGP_WSBEiJ_T0063215	-	1040	-	MGP_WSBEiJ_P0063215	306 (aa)	-	-
MGP_WSBEiJ_T0063214	-	6563	XM_006501660	MGP_WSBEiJ_P0063214	642 (aa)	XP_006501723	Q91WJ8
MGP_WSBEiJ_T0063222	-	4527	-	MGP_WSBEiJ_P0063222	642 (aa)	-	-
MGP_WSBEiJ_T0063223	-	432	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063219	-	2093	-	MGP_WSBEiJ_P0063219	69 (aa)	-	-
MGP_WSBEiJ_T0063218	-	2525	-	MGP_WSBEiJ_P0063218	651 (aa)	-	-
MGP_WSBEiJ_T0063226	-	795	-	MGP_WSBEiJ_P0063226	141 (aa)	-	-
MGP_WSBEiJ_T0063227	-	799	-	MGP_WSBEiJ_P0063227	173 (aa)	-	-
MGP_WSBEiJ_T0063224	-	585	-	MGP_WSBEiJ_P0063224	149 (aa)	-	-
MGP_WSBEiJ_T0063225	-	512	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063229	-	5102	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063232	-	665	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063231	-	4025	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063220	-	2373	-	MGP_WSBEiJ_P0063220	643 (aa)	-	-
MGP_WSBEiJ_T0063230	-	424	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0027222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027222	Fubp1	50	36.364	MGP_WSBEiJ_G0019063	Nova1	57	36.364
MGP_WSBEiJ_G0027222	Fubp1	72	34.524	MGP_WSBEiJ_G0034347	Pcbp4	76	33.684
MGP_WSBEiJ_G0027222	Fubp1	61	36.765	MGP_WSBEiJ_G0030895	Nova2	54	36.765
MGP_WSBEiJ_G0027222	Fubp1	69	30.168	MGP_WSBEiJ_G0030894	-	53	36.765
MGP_WSBEiJ_G0027222	Fubp1	72	33.019	MGP_WSBEiJ_G0016784	Pcbp3	66	31.250
MGP_WSBEiJ_G0027222	Fubp1	96	64.410	MGP_WSBEiJ_G0023220	Khsrp	70	67.654
MGP_WSBEiJ_G0027222	Fubp1	94	59.208	MGP_WSBEiJ_G0024851	Fubp3	96	64.324