EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0027273 (Gene tree)
Gene ID: -
Gene Symbol: Chd7
Alias: A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 200672 bases
Position: chr4:5297957-5498628
Accession: 2444748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0063528	ResIII	PF04851.15	4.4e-06	1	1
MGP_WSBEiJ_P0063529	ResIII	PF04851.15	4.4e-06	1	1
MGP_WSBEiJ_P0063528	BRK	PF07533.16	4.7e-37	1	2
MGP_WSBEiJ_P0063528	BRK	PF07533.16	4.7e-37	2	2
MGP_WSBEiJ_P0063529	BRK	PF07533.16	4.7e-37	1	2
MGP_WSBEiJ_P0063529	BRK	PF07533.16	4.7e-37	2	2
MGP_WSBEiJ_P0063531	BRK	PF07533.16	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0063527	-	2381	-	MGP_WSBEiJ_P0063527	631 (aa)	-	-
MGP_WSBEiJ_T0063526	-	4947	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063532	-	11046	-	MGP_WSBEiJ_P0063532	2985 (aa)	-	-
MGP_WSBEiJ_T0063533	-	741	-	-	- (aa)	-	-
MGP_WSBEiJ_T0063530	-	458	-	MGP_WSBEiJ_P0063530	19 (aa)	-	-
MGP_WSBEiJ_T0063531	-	3463	-	MGP_WSBEiJ_P0063531	941 (aa)	-	-
MGP_WSBEiJ_T0063529	-	10216	-	MGP_WSBEiJ_P0063529	2986 (aa)	-	-
MGP_WSBEiJ_T0063528	-	9445	-	MGP_WSBEiJ_P0063528	2986 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027273	Chd7	72	64.905	MGP_WSBEiJ_G0026059	Chd6	84	72.837
MGP_WSBEiJ_G0027273	Chd7	94	54.334	MGP_WSBEiJ_G0033056	Chd9	83	69.649