EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027553 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp3
Alias: 5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1
Full Name: polypyrimidine tract binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 80190 bases
Position: chr4:57870962-57951151
Accession: 1923334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0064747	RRM_5	PF13893.6	1.1e-61	1	3
MGP_WSBEiJ_P0064747	RRM_5	PF13893.6	1.1e-61	2	3
MGP_WSBEiJ_P0064747	RRM_5	PF13893.6	1.1e-61	3	3
MGP_WSBEiJ_P0064746	RRM_5	PF13893.6	1.2e-61	1	3
MGP_WSBEiJ_P0064746	RRM_5	PF13893.6	1.2e-61	2	3
MGP_WSBEiJ_P0064746	RRM_5	PF13893.6	1.2e-61	3	3
MGP_WSBEiJ_P0064749	RRM_5	PF13893.6	1.3e-47	1	1
MGP_WSBEiJ_P0064752	RRM_5	PF13893.6	7.1e-06	1	1
MGP_WSBEiJ_P0064747	RRM_1	PF00076.22	2.1e-31	1	3
MGP_WSBEiJ_P0064747	RRM_1	PF00076.22	2.1e-31	2	3
MGP_WSBEiJ_P0064747	RRM_1	PF00076.22	2.1e-31	3	3
MGP_WSBEiJ_P0064746	RRM_1	PF00076.22	2.2e-31	1	3
MGP_WSBEiJ_P0064746	RRM_1	PF00076.22	2.2e-31	2	3
MGP_WSBEiJ_P0064746	RRM_1	PF00076.22	2.2e-31	3	3
MGP_WSBEiJ_P0064752	RRM_1	PF00076.22	2.8e-11	1	1
MGP_WSBEiJ_P0064749	RRM_1	PF00076.22	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0064754	-	606	-	MGP_WSBEiJ_P0064754	104 (aa)	-	-
MGP_WSBEiJ_T0064748	-	669	-	-	- (aa)	-	-
MGP_WSBEiJ_T0064749	-	566	-	MGP_WSBEiJ_P0064749	188 (aa)	-	-
MGP_WSBEiJ_T0064746	-	6676	XM_006537851	MGP_WSBEiJ_P0064746	554 (aa)	XP_006537914	Q8BHD7
MGP_WSBEiJ_T0064747	-	3409	-	MGP_WSBEiJ_P0064747	551 (aa)	-	-
MGP_WSBEiJ_T0064753	-	447	-	-	- (aa)	-	-
MGP_WSBEiJ_T0064752	-	550	-	MGP_WSBEiJ_P0064752	146 (aa)	-	-
MGP_WSBEiJ_T0064751	-	558	-	MGP_WSBEiJ_P0064751	41 (aa)	-	-
MGP_WSBEiJ_T0064750	-	1286	-	MGP_WSBEiJ_P0064750	45 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027553	Ptbp3	91	78.195	MGP_WSBEiJ_G0027063	Ptbp2	99	69.835
MGP_WSBEiJ_G0027553	Ptbp3	83	35.537	MGP_WSBEiJ_G0031110	Hnrnpl	55	36.207