EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027657 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 153287 bases
Position: chr4:90578689-90731975
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0065157	RRM_5	PF13893.6	1.3e-12	1	2
MGP_WSBEiJ_P0065157	RRM_5	PF13893.6	1.3e-12	2	2
MGP_WSBEiJ_P0065156	RRM_5	PF13893.6	1.4e-12	1	2
MGP_WSBEiJ_P0065156	RRM_5	PF13893.6	1.4e-12	2	2
MGP_WSBEiJ_P0065159	RRM_5	PF13893.6	1.7e-12	1	2
MGP_WSBEiJ_P0065159	RRM_5	PF13893.6	1.7e-12	2	2
MGP_WSBEiJ_P0065158	RRM_5	PF13893.6	1.9e-12	1	2
MGP_WSBEiJ_P0065158	RRM_5	PF13893.6	1.9e-12	2	2
MGP_WSBEiJ_P0065162	RRM_5	PF13893.6	2.1e-12	1	2
MGP_WSBEiJ_P0065162	RRM_5	PF13893.6	2.1e-12	2	2
MGP_WSBEiJ_P0065161	RRM_5	PF13893.6	2.2e-12	1	2
MGP_WSBEiJ_P0065161	RRM_5	PF13893.6	2.2e-12	2	2
MGP_WSBEiJ_P0065157	RRM_1	PF00076.22	1.1e-66	1	3
MGP_WSBEiJ_P0065157	RRM_1	PF00076.22	1.1e-66	2	3
MGP_WSBEiJ_P0065157	RRM_1	PF00076.22	1.1e-66	3	3
MGP_WSBEiJ_P0065156	RRM_1	PF00076.22	1.4e-66	1	3
MGP_WSBEiJ_P0065156	RRM_1	PF00076.22	1.4e-66	2	3
MGP_WSBEiJ_P0065156	RRM_1	PF00076.22	1.4e-66	3	3
MGP_WSBEiJ_P0065159	RRM_1	PF00076.22	1.6e-66	1	3
MGP_WSBEiJ_P0065159	RRM_1	PF00076.22	1.6e-66	2	3
MGP_WSBEiJ_P0065159	RRM_1	PF00076.22	1.6e-66	3	3
MGP_WSBEiJ_P0065158	RRM_1	PF00076.22	1.7e-66	1	3
MGP_WSBEiJ_P0065158	RRM_1	PF00076.22	1.7e-66	2	3
MGP_WSBEiJ_P0065158	RRM_1	PF00076.22	1.7e-66	3	3
MGP_WSBEiJ_P0065161	RRM_1	PF00076.22	2e-66	1	3
MGP_WSBEiJ_P0065161	RRM_1	PF00076.22	2e-66	2	3
MGP_WSBEiJ_P0065161	RRM_1	PF00076.22	2e-66	3	3
MGP_WSBEiJ_P0065162	RRM_1	PF00076.22	2e-66	1	3
MGP_WSBEiJ_P0065162	RRM_1	PF00076.22	2e-66	2	3
MGP_WSBEiJ_P0065162	RRM_1	PF00076.22	2e-66	3	3
MGP_WSBEiJ_P0065164	RRM_1	PF00076.22	7.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0065167	-	450	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065166	-	511	-	MGP_WSBEiJ_P0065166	23 (aa)	-	-
MGP_WSBEiJ_T0065165	-	408	-	MGP_WSBEiJ_P0065165	83 (aa)	-	-
MGP_WSBEiJ_T0065164	-	425	-	MGP_WSBEiJ_P0065164	125 (aa)	-	-
MGP_WSBEiJ_T0065163	-	3193	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065158	-	3800	-	MGP_WSBEiJ_P0065158	376 (aa)	-	-
MGP_WSBEiJ_T0065161	-	1167	-	MGP_WSBEiJ_P0065161	388 (aa)	-	-
MGP_WSBEiJ_T0065160	-	930	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065156	-	3733	XM_006502778	MGP_WSBEiJ_P0065156	360 (aa)	XP_006502841	Q60899
MGP_WSBEiJ_T0065157	-	3674	-	MGP_WSBEiJ_P0065157	347 (aa)	-	-
MGP_WSBEiJ_T0065159	-	3843	-	MGP_WSBEiJ_P0065159	373 (aa)	-	-
MGP_WSBEiJ_T0065168	-	415	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065162	-	1282	-	MGP_WSBEiJ_P0065162	389 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0027657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027657	Elavl2	59	33.784	MGP_WSBEiJ_G0026861	Rbm8a	58	32.353
MGP_WSBEiJ_G0027657	Elavl2	88	39.506	MGP_WSBEiJ_G0023480	Celf4	91	37.037
MGP_WSBEiJ_G0027657	Elavl2	89	37.349	MGP_WSBEiJ_G0021110	Pabpc1	87	37.349
MGP_WSBEiJ_G0027657	Elavl2	64	37.500	MGP_WSBEiJ_G0016876	Cirbp	76	37.500
MGP_WSBEiJ_G0027657	Elavl2	76	41.975	MGP_WSBEiJ_G0026790	Celf3	63	41.975
MGP_WSBEiJ_G0027657	Elavl2	97	30.857	MGP_WSBEiJ_G0016950	Celf5	97	30.857
MGP_WSBEiJ_G0027657	Elavl2	96	34.615	MGP_WSBEiJ_G0030144	Tia1	89	34.615
MGP_WSBEiJ_G0027657	Elavl2	89	32.680	MGP_WSBEiJ_G0017782	-	83	32.680
MGP_WSBEiJ_G0027657	Elavl2	89	37.037	MGP_WSBEiJ_G0035146	Pabpc5	94	37.037
MGP_WSBEiJ_G0027657	Elavl2	66	30.952	MGP_WSBEiJ_G0028077	Trnau1ap	98	30.952
MGP_WSBEiJ_G0027657	Elavl2	100	89.751	MGP_WSBEiJ_G0027789	Elavl4	99	89.315
MGP_WSBEiJ_G0027657	Elavl2	63	32.911	MGP_WSBEiJ_G0034647	Rbm3	82	38.710
MGP_WSBEiJ_G0027657	Elavl2	89	76.375	MGP_WSBEiJ_G0032466	Elavl1	94	76.375
MGP_WSBEiJ_G0027657	Elavl2	92	34.940	MGP_WSBEiJ_G0026082	Pabpc1l	64	34.940
MGP_WSBEiJ_G0027657	Elavl2	89	36.145	MGP_WSBEiJ_G0023640	Pabpc2	59	36.145
MGP_WSBEiJ_G0027657	Elavl2	85	41.975	MGP_WSBEiJ_G0025390	Celf1	69	41.975
MGP_WSBEiJ_G0027657	Elavl2	83	39.506	MGP_WSBEiJ_G0024598	Celf2	87	33.333
MGP_WSBEiJ_G0027657	Elavl2	72	32.632	MGP_WSBEiJ_G0018283	Msi2	70	31.250
MGP_WSBEiJ_G0027657	Elavl2	100	79.292	MGP_WSBEiJ_G0033593	Elavl3	100	78.400
MGP_WSBEiJ_G0027657	Elavl2	67	35.714	MGP_WSBEiJ_G0029273	Snrnp35	60	37.500
MGP_WSBEiJ_G0027657	Elavl2	93	34.615	MGP_WSBEiJ_G0032221	Tial1	72	34.615
MGP_WSBEiJ_G0027657	Elavl2	69	37.209	MGP_WSBEiJ_G0034510	Rbms3	83	37.222
MGP_WSBEiJ_G0027657	Elavl2	59	33.784	MGP_WSBEiJ_G0016249	Rbm8a2	58	32.353
MGP_WSBEiJ_G0027657	Elavl2	78	40.741	MGP_WSBEiJ_G0034019	Celf6	89	37.037
MGP_WSBEiJ_G0027657	Elavl2	60	41.558	MGP_WSBEiJ_G0025028	Rbms1	51	37.209
MGP_WSBEiJ_G0027657	Elavl2	89	34.940	MGP_WSBEiJ_G0026432	Pabpc4l	96	34.940
MGP_WSBEiJ_G0027657	Elavl2	89	34.940	MGP_WSBEiJ_G0027947	-	96	32.576
MGP_WSBEiJ_G0027657	Elavl2	90	37.349	MGP_WSBEiJ_G0022441	Pabpc6	60	37.349
MGP_WSBEiJ_G0027657	Elavl2	62	30.864	MGP_WSBEiJ_G0028968	Hnrnpd	70	32.000
MGP_WSBEiJ_G0027657	Elavl2	73	34.831	MGP_WSBEiJ_G0034856	Rbmx	86	34.831