EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027768 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 107084 bases
Position: chr4:108304838-108411921
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0065683	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_WSBEiJ_P0065683	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_WSBEiJ_P0065685	zf-CCHC	PF00098.23	8e-11	1	2
MGP_WSBEiJ_P0065685	zf-CCHC	PF00098.23	8e-11	2	2
MGP_WSBEiJ_P0065683	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_WSBEiJ_P0065683	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_WSBEiJ_P0065685	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_WSBEiJ_P0065685	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_WSBEiJ_P0065686	PAP_assoc	PF03828.19	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0065688	-	541	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065689	-	567	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065691	-	484	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065690	-	591	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065693	-	587	-	MGP_WSBEiJ_P0065693	105 (aa)	-	-
MGP_WSBEiJ_T0065692	-	2472	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065683	-	6054	XM_006502978	MGP_WSBEiJ_P0065683	1644 (aa)	XP_006503041	B2RX14
MGP_WSBEiJ_T0065686	-	3283	-	MGP_WSBEiJ_P0065686	1006 (aa)	-	-
MGP_WSBEiJ_T0065687	-	628	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065684	-	679	-	MGP_WSBEiJ_P0065684	63 (aa)	-	-
MGP_WSBEiJ_T0065685	-	5865	-	MGP_WSBEiJ_P0065685	1648 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0027768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027768	Zcchc11	59	58.396	MGP_WSBEiJ_G0019971	Zcchc6	60	67.209