EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027781 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 35894 bases
Position: chr4:109090358-109126251
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0065761	Calreticulin	PF00262.18	6.3e-76	1	2
MGP_WSBEiJ_P0065761	Calreticulin	PF00262.18	6.3e-76	2	2
MGP_WSBEiJ_P0065762	Calreticulin	PF00262.18	6.9e-52	1	2
MGP_WSBEiJ_P0065762	Calreticulin	PF00262.18	6.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0065761	-	1320	XM_006502653	MGP_WSBEiJ_P0065761	439 (aa)	XP_006502718	A2A8Z3
MGP_WSBEiJ_T0065763	-	1607	-	MGP_WSBEiJ_P0065763	420 (aa)	-	-
MGP_WSBEiJ_T0065762	-	1583	-	MGP_WSBEiJ_P0065762	313 (aa)	-	-
MGP_WSBEiJ_T0065764	-	532	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0027781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027781's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027781	Calr4	77	35.250	MGP_WSBEiJ_G0032960	Clgn	65	34.750
MGP_WSBEiJ_G0027781	Calr4	86	46.277	MGP_WSBEiJ_G0032910	Calr3	86	47.262
MGP_WSBEiJ_G0027781	Calr4	77	66.667	MGP_WSBEiJ_G0033002	Calr	82	66.181
MGP_WSBEiJ_G0027781	Calr4	78	36.790	MGP_WSBEiJ_G0017613	Canx	68	37.037