EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0027789 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 146971 bases
Position: chr4:110103873-110250843
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0065796	RRM_5	PF13893.6	2.8e-13	1	2
MGP_WSBEiJ_P0065796	RRM_5	PF13893.6	2.8e-13	2	2
MGP_WSBEiJ_P0065795	RRM_5	PF13893.6	3.1e-13	1	2
MGP_WSBEiJ_P0065795	RRM_5	PF13893.6	3.1e-13	2	2
MGP_WSBEiJ_P0065800	RRM_5	PF13893.6	3.2e-13	1	2
MGP_WSBEiJ_P0065800	RRM_5	PF13893.6	3.2e-13	2	2
MGP_WSBEiJ_P0065797	RRM_5	PF13893.6	3.4e-13	1	2
MGP_WSBEiJ_P0065797	RRM_5	PF13893.6	3.4e-13	2	2
MGP_WSBEiJ_P0065798	RRM_5	PF13893.6	3.6e-13	1	2
MGP_WSBEiJ_P0065798	RRM_5	PF13893.6	3.6e-13	2	2
MGP_WSBEiJ_P0065801	RRM_5	PF13893.6	3.9e-13	1	2
MGP_WSBEiJ_P0065801	RRM_5	PF13893.6	3.9e-13	2	2
MGP_WSBEiJ_P0065799	RRM_5	PF13893.6	3.9e-13	1	2
MGP_WSBEiJ_P0065799	RRM_5	PF13893.6	3.9e-13	2	2
MGP_WSBEiJ_P0065796	RRM_1	PF00076.22	2.1e-65	1	3
MGP_WSBEiJ_P0065796	RRM_1	PF00076.22	2.1e-65	2	3
MGP_WSBEiJ_P0065796	RRM_1	PF00076.22	2.1e-65	3	3
MGP_WSBEiJ_P0065800	RRM_1	PF00076.22	2.4e-65	1	3
MGP_WSBEiJ_P0065800	RRM_1	PF00076.22	2.4e-65	2	3
MGP_WSBEiJ_P0065800	RRM_1	PF00076.22	2.4e-65	3	3
MGP_WSBEiJ_P0065795	RRM_1	PF00076.22	2.4e-65	1	3
MGP_WSBEiJ_P0065795	RRM_1	PF00076.22	2.4e-65	2	3
MGP_WSBEiJ_P0065795	RRM_1	PF00076.22	2.4e-65	3	3
MGP_WSBEiJ_P0065797	RRM_1	PF00076.22	2.5e-65	1	3
MGP_WSBEiJ_P0065797	RRM_1	PF00076.22	2.5e-65	2	3
MGP_WSBEiJ_P0065797	RRM_1	PF00076.22	2.5e-65	3	3
MGP_WSBEiJ_P0065798	RRM_1	PF00076.22	2.8e-65	1	3
MGP_WSBEiJ_P0065798	RRM_1	PF00076.22	2.8e-65	2	3
MGP_WSBEiJ_P0065798	RRM_1	PF00076.22	2.8e-65	3	3
MGP_WSBEiJ_P0065801	RRM_1	PF00076.22	2.9e-65	1	3
MGP_WSBEiJ_P0065801	RRM_1	PF00076.22	2.9e-65	2	3
MGP_WSBEiJ_P0065801	RRM_1	PF00076.22	2.9e-65	3	3
MGP_WSBEiJ_P0065799	RRM_1	PF00076.22	3e-65	1	3
MGP_WSBEiJ_P0065799	RRM_1	PF00076.22	3e-65	2	3
MGP_WSBEiJ_P0065799	RRM_1	PF00076.22	3e-65	3	3
MGP_WSBEiJ_P0065803	RRM_1	PF00076.22	1.2e-20	1	1
MGP_WSBEiJ_P0065805	RRM_1	PF00076.22	6.7e-13	1	1
MGP_WSBEiJ_P0065806	RRM_1	PF00076.22	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0065804	-	464	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065805	-	662	-	MGP_WSBEiJ_P0065805	94 (aa)	-	-
MGP_WSBEiJ_T0065795	-	3999	XM_006502793	MGP_WSBEiJ_P0065795	366 (aa)	XP_006502856	Q61701
MGP_WSBEiJ_T0065796	-	3764	-	MGP_WSBEiJ_P0065796	356 (aa)	-	-
MGP_WSBEiJ_T0065797	-	4108	-	MGP_WSBEiJ_P0065797	371 (aa)	-	-
MGP_WSBEiJ_T0065798	-	4026	-	MGP_WSBEiJ_P0065798	380 (aa)	-	-
MGP_WSBEiJ_T0065799	-	4150	-	MGP_WSBEiJ_P0065799	385 (aa)	-	-
MGP_WSBEiJ_T0065806	-	488	-	MGP_WSBEiJ_P0065806	92 (aa)	-	-
MGP_WSBEiJ_T0065800	-	3778	-	MGP_WSBEiJ_P0065800	366 (aa)	-	-
MGP_WSBEiJ_T0065801	-	3802	-	MGP_WSBEiJ_P0065801	383 (aa)	-	-
MGP_WSBEiJ_T0065802	-	869	-	-	- (aa)	-	-
MGP_WSBEiJ_T0065803	-	644	-	MGP_WSBEiJ_P0065803	137 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0027789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0027789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0027789	Elavl4	54	33.784	MGP_WSBEiJ_G0026861	Rbm8a	62	30.693
MGP_WSBEiJ_G0027789	Elavl4	88	35.897	MGP_WSBEiJ_G0032221	Tial1	73	35.897
MGP_WSBEiJ_G0027789	Elavl4	88	32.026	MGP_WSBEiJ_G0017782	-	82	32.026
MGP_WSBEiJ_G0027789	Elavl4	57	37.037	MGP_WSBEiJ_G0029273	Snrnp35	59	33.803
MGP_WSBEiJ_G0027789	Elavl4	70	35.484	MGP_WSBEiJ_G0026432	Pabpc4l	96	30.065
MGP_WSBEiJ_G0027789	Elavl4	88	38.272	MGP_WSBEiJ_G0023480	Celf4	91	35.802
MGP_WSBEiJ_G0027789	Elavl4	88	32.468	MGP_WSBEiJ_G0022441	Pabpc6	60	32.468
MGP_WSBEiJ_G0027789	Elavl4	81	38.272	MGP_WSBEiJ_G0024598	Celf2	61	38.272
MGP_WSBEiJ_G0027789	Elavl4	85	40.741	MGP_WSBEiJ_G0034019	Celf6	95	35.802
MGP_WSBEiJ_G0027789	Elavl4	94	35.897	MGP_WSBEiJ_G0030144	Tia1	98	32.895
MGP_WSBEiJ_G0027789	Elavl4	89	73.585	MGP_WSBEiJ_G0032466	Elavl1	98	73.585
MGP_WSBEiJ_G0027789	Elavl4	54	33.784	MGP_WSBEiJ_G0016249	Rbm8a2	61	30.693
MGP_WSBEiJ_G0027789	Elavl4	66	42.373	MGP_WSBEiJ_G0016882	Dazap1	64	30.275
MGP_WSBEiJ_G0027789	Elavl4	70	36.458	MGP_WSBEiJ_G0025028	Rbms1	53	32.773
MGP_WSBEiJ_G0027789	Elavl4	88	36.145	MGP_WSBEiJ_G0021110	Pabpc1	89	36.145
MGP_WSBEiJ_G0027789	Elavl4	70	36.458	MGP_WSBEiJ_G0034510	Rbms3	83	37.097
MGP_WSBEiJ_G0027789	Elavl4	78	30.088	MGP_WSBEiJ_G0018283	Msi2	84	30.208
MGP_WSBEiJ_G0027789	Elavl4	99	79.893	MGP_WSBEiJ_G0033593	Elavl3	99	80.323
MGP_WSBEiJ_G0027789	Elavl4	85	40.741	MGP_WSBEiJ_G0026790	Celf3	61	40.741
MGP_WSBEiJ_G0027789	Elavl4	74	33.708	MGP_WSBEiJ_G0034856	Rbmx	86	33.708
MGP_WSBEiJ_G0027789	Elavl4	86	32.576	MGP_WSBEiJ_G0027947	-	96	32.576
MGP_WSBEiJ_G0027789	Elavl4	70	38.889	MGP_WSBEiJ_G0016876	Cirbp	84	38.889
MGP_WSBEiJ_G0027789	Elavl4	72	35.821	MGP_WSBEiJ_G0029897	Tra2a	59	37.097
MGP_WSBEiJ_G0027789	Elavl4	58	31.646	MGP_WSBEiJ_G0034647	Rbm3	82	38.710
MGP_WSBEiJ_G0027789	Elavl4	74	37.500	MGP_WSBEiJ_G0016950	Celf5	61	38.095
MGP_WSBEiJ_G0027789	Elavl4	99	89.315	MGP_WSBEiJ_G0027657	Elavl2	100	89.751
MGP_WSBEiJ_G0027789	Elavl4	88	34.940	MGP_WSBEiJ_G0023640	Pabpc2	59	34.940
MGP_WSBEiJ_G0027789	Elavl4	89	33.735	MGP_WSBEiJ_G0026082	Pabpc1l	62	33.735
MGP_WSBEiJ_G0027789	Elavl4	78	40.741	MGP_WSBEiJ_G0025390	Celf1	62	40.741