EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0028172 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 50070 bases
Position: chr4:137414419-137464488
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0067513	RRM_1	PF00076.22	2e-43	1	3
MGP_WSBEiJ_P0067513	RRM_1	PF00076.22	2e-43	2	3
MGP_WSBEiJ_P0067513	RRM_1	PF00076.22	2e-43	3	3
MGP_WSBEiJ_P0067516	RRM_1	PF00076.22	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0067513	-	20734	XM_006539221	MGP_WSBEiJ_P0067513	559 (aa)	XP_006539284	A2AW40
MGP_WSBEiJ_T0067514	-	859	-	MGP_WSBEiJ_P0067514	103 (aa)	-	-
MGP_WSBEiJ_T0067515	-	576	-	MGP_WSBEiJ_P0067515	72 (aa)	-	-
MGP_WSBEiJ_T0067516	-	980	-	MGP_WSBEiJ_P0067516	270 (aa)	-	-
MGP_WSBEiJ_T0067517	-	292	-	MGP_WSBEiJ_P0067517	73 (aa)	-	-
MGP_WSBEiJ_T0067518	-	474	-	-	- (aa)	-	-
MGP_WSBEiJ_T0067519	-	3243	-	-	- (aa)	-	-
MGP_WSBEiJ_T0067520	-	1911	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0028172	Hnrnpr	59	56.329	MGP_WSBEiJ_G0026571	Rbm46	65	56.774
MGP_WSBEiJ_G0028172	Hnrnpr	54	57.823	MGP_WSBEiJ_G0024306	A1cf	51	53.896
MGP_WSBEiJ_G0028172	Hnrnpr	79	46.205	MGP_WSBEiJ_G0028775	Rbm47	88	59.859
MGP_WSBEiJ_G0028172	Hnrnpr	99	81.716	MGP_WSBEiJ_G0034225	Syncrip	97	80.440
MGP_WSBEiJ_G0028172	Hnrnpr	57	37.908	MGP_WSBEiJ_G0023561	Dnd1	62	33.040