EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0068097	RRM_1	PF00076.22	1.2e-26	1	2
MGP_WSBEiJ_P0068097	RRM_1	PF00076.22	1.2e-26	2	2
MGP_WSBEiJ_P0068090	RRM_1	PF00076.22	4.3e-26	1	2
MGP_WSBEiJ_P0068090	RRM_1	PF00076.22	4.3e-26	2	2
MGP_WSBEiJ_P0068080	RRM_1	PF00076.22	4.5e-26	1	2
MGP_WSBEiJ_P0068080	RRM_1	PF00076.22	4.5e-26	2	2
MGP_WSBEiJ_P0068094	RRM_1	PF00076.22	4.5e-26	1	2
MGP_WSBEiJ_P0068094	RRM_1	PF00076.22	4.5e-26	2	2
MGP_WSBEiJ_P0068079	RRM_1	PF00076.22	4.7e-26	1	2
MGP_WSBEiJ_P0068079	RRM_1	PF00076.22	4.7e-26	2	2
MGP_WSBEiJ_P0068096	RRM_1	PF00076.22	4.7e-26	1	2
MGP_WSBEiJ_P0068096	RRM_1	PF00076.22	4.7e-26	2	2
MGP_WSBEiJ_P0068078	RRM_1	PF00076.22	4.9e-26	1	2
MGP_WSBEiJ_P0068078	RRM_1	PF00076.22	4.9e-26	2	2
MGP_WSBEiJ_P0068095	RRM_1	PF00076.22	4.9e-26	1	2
MGP_WSBEiJ_P0068095	RRM_1	PF00076.22	4.9e-26	2	2
MGP_WSBEiJ_P0068077	RRM_1	PF00076.22	1.2e-25	1	2
MGP_WSBEiJ_P0068077	RRM_1	PF00076.22	1.2e-25	2	2
MGP_WSBEiJ_P0068099	RRM_1	PF00076.22	4e-15	1	1
MGP_WSBEiJ_P0068100	RRM_1	PF00076.22	4.9e-11	1	1
MGP_WSBEiJ_P0068091	RRM_1	PF00076.22	6.5e-09	1	1
MGP_WSBEiJ_P0068093	RRM_1	PF00076.22	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0068090	-	1859	-	MGP_WSBEiJ_P0068090	295 (aa)	-	-
MGP_WSBEiJ_T0068091	-	570	-	MGP_WSBEiJ_P0068091	128 (aa)	-	-
MGP_WSBEiJ_T0068092	-	769	-	MGP_WSBEiJ_P0068092	19 (aa)	-	-
MGP_WSBEiJ_T0068093	-	703	-	MGP_WSBEiJ_P0068093	84 (aa)	-	-
MGP_WSBEiJ_T0068094	-	1096	-	MGP_WSBEiJ_P0068094	298 (aa)	-	-
MGP_WSBEiJ_T0068095	-	923	-	MGP_WSBEiJ_P0068095	302 (aa)	-	-
MGP_WSBEiJ_T0068096	-	1011	-	MGP_WSBEiJ_P0068096	304 (aa)	-	-
MGP_WSBEiJ_T0068097	-	709	-	MGP_WSBEiJ_P0068097	199 (aa)	-	-
MGP_WSBEiJ_T0068098	-	1411	-	MGP_WSBEiJ_P0068098	84 (aa)	-	-
MGP_WSBEiJ_T0068099	-	818	-	MGP_WSBEiJ_P0068099	243 (aa)	-	-
MGP_WSBEiJ_T0068100	-	740	-	MGP_WSBEiJ_P0068100	149 (aa)	-	-
MGP_WSBEiJ_T0068101	-	370	-	-	- (aa)	-	-
MGP_WSBEiJ_T0068083	-	529	-	MGP_WSBEiJ_P0068083	98 (aa)	-	-
MGP_WSBEiJ_T0068082	-	731	-	-	- (aa)	-	-
MGP_WSBEiJ_T0068081	-	1773	-	MGP_WSBEiJ_P0068081	298 (aa)	-	-
MGP_WSBEiJ_T0068080	-	6437	-	MGP_WSBEiJ_P0068080	298 (aa)	-	-
MGP_WSBEiJ_T0068087	-	2006	-	MGP_WSBEiJ_P0068087	298 (aa)	-	-
MGP_WSBEiJ_T0068086	-	358	-	-	- (aa)	-	-
MGP_WSBEiJ_T0068085	-	908	-	-	- (aa)	-	-
MGP_WSBEiJ_T0068084	-	676	-	MGP_WSBEiJ_P0068084	88 (aa)	-	-
MGP_WSBEiJ_T0068089	-	1304	-	MGP_WSBEiJ_P0068089	285 (aa)	-	-
MGP_WSBEiJ_T0068088	-	1011	-	MGP_WSBEiJ_P0068088	34 (aa)	-	-
MGP_WSBEiJ_T0068078	-	6367	-	MGP_WSBEiJ_P0068078	302 (aa)	-	-
MGP_WSBEiJ_T0068079	-	6455	-	MGP_WSBEiJ_P0068079	304 (aa)	-	-
MGP_WSBEiJ_T0068077	-	7419	XM_011250237	MGP_WSBEiJ_P0068077	414 (aa)	XP_011248539	Q921F2

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0028324	Tardbp	64	30.208	MGP_WSBEiJ_G0029908	Hnrnpa2b1	66	30.348
MGP_WSBEiJ_G0028324	Tardbp	85	33.508	MGP_WSBEiJ_G0016882	Dazap1	89	35.065
MGP_WSBEiJ_G0028324	Tardbp	86	33.146	MGP_WSBEiJ_G0017632	Hnrnpab	82	32.099
MGP_WSBEiJ_G0028324	Tardbp	70	34.247	MGP_WSBEiJ_G0018283	Msi2	100	35.398
MGP_WSBEiJ_G0028324	Tardbp	79	34.021	MGP_WSBEiJ_G0029148	Msi1	62	34.021
MGP_WSBEiJ_G0028324	Tardbp	77	38.194	MGP_WSBEiJ_G0028968	Hnrnpd	100	64.000
MGP_WSBEiJ_G0028324	Tardbp	77	31.447	MGP_WSBEiJ_G0028970	Hnrnpdl	64	30.000
MGP_WSBEiJ_G0028324	Tardbp	72	38.806	MGP_WSBEiJ_G0032466	Elavl1	59	31.481