EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0028946 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 84107 bases
Position: chr5:93527454-93611560
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0071495	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_WSBEiJ_P0071493	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_WSBEiJ_P0071491	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_WSBEiJ_P0071496	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_WSBEiJ_P0071498	MMR_HSR1	PF01926.23	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0071498	-	1380	-	MGP_WSBEiJ_P0071498	432 (aa)	-	-
MGP_WSBEiJ_T0071499	-	1119	-	-	- (aa)	-	-
MGP_WSBEiJ_T0071496	-	2428	-	MGP_WSBEiJ_P0071496	431 (aa)	-	-
MGP_WSBEiJ_T0071497	-	434	-	MGP_WSBEiJ_P0071497	97 (aa)	-	-
MGP_WSBEiJ_T0071494	-	1066	-	MGP_WSBEiJ_P0071494	204 (aa)	-	-
MGP_WSBEiJ_T0071495	-	1792	-	MGP_WSBEiJ_P0071495	425 (aa)	-	-
MGP_WSBEiJ_T0071492	-	640	-	-	- (aa)	-	-
MGP_WSBEiJ_T0071493	-	3475	-	MGP_WSBEiJ_P0071493	425 (aa)	-	-
MGP_WSBEiJ_T0071491	-	5029	XM_006535104	MGP_WSBEiJ_P0071491	429 (aa)	XP_006535161	Q8C1B7

Gene Model

Click here to download MGP_WSBEiJ_G0028946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0028946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0028946	Sept11	69	43.234	MGP_WSBEiJ_G0015752	Sept2	100	42.202
MGP_WSBEiJ_G0028946	Sept11	100	82.201	MGP_WSBEiJ_G0034742	Sept6	100	82.028
MGP_WSBEiJ_G0028946	Sept11	60	38.077	MGP_WSBEiJ_G0021788	Sept12	82	37.931
MGP_WSBEiJ_G0028946	Sept11	67	43.878	MGP_WSBEiJ_G0018266	Sept4	85	45.000
MGP_WSBEiJ_G0028946	Sept11	69	44.000	MGP_WSBEiJ_G0021448	Sept3	89	44.000
MGP_WSBEiJ_G0028946	Sept11	98	72.771	MGP_WSBEiJ_G0016649	Sept10	85	76.712
MGP_WSBEiJ_G0028946	Sept11	76	40.762	MGP_WSBEiJ_G0032165	Sept1	100	40.816
MGP_WSBEiJ_G0028946	Sept11	76	41.493	MGP_WSBEiJ_G0021922	Sept5	90	40.828
MGP_WSBEiJ_G0028946	Sept11	99	79.157	MGP_WSBEiJ_G0017661	Sept8	88	81.915
MGP_WSBEiJ_G0028946	Sept11	99	39.954	MGP_WSBEiJ_G0033616	Sept7	80	41.737
MGP_WSBEiJ_G0028946	Sept11	67	42.953	MGP_WSBEiJ_G0018801	Sept9	81	46.970