EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0028968 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpd
Alias: Auf1|Hnrpd
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 22837 bases
Position: chr5:100652683-100675519
Accession: 101947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0071581	CBFNT	PF08143.11	4.1e-07	1	1
MGP_WSBEiJ_P0071580	CBFNT	PF08143.11	5.4e-07	1	1
MGP_WSBEiJ_P0071579	CBFNT	PF08143.11	5.2e-06	1	1
MGP_WSBEiJ_P0071578	CBFNT	PF08143.11	6.8e-06	1	1
MGP_WSBEiJ_P0071581	RRM_1	PF00076.22	6.8e-36	1	2
MGP_WSBEiJ_P0071581	RRM_1	PF00076.22	6.8e-36	2	2
MGP_WSBEiJ_P0071579	RRM_1	PF00076.22	8.3e-36	1	2
MGP_WSBEiJ_P0071579	RRM_1	PF00076.22	8.3e-36	2	2
MGP_WSBEiJ_P0071580	RRM_1	PF00076.22	1.1e-35	1	2
MGP_WSBEiJ_P0071580	RRM_1	PF00076.22	1.1e-35	2	2
MGP_WSBEiJ_P0071578	RRM_1	PF00076.22	1.3e-35	1	2
MGP_WSBEiJ_P0071578	RRM_1	PF00076.22	1.3e-35	2	2
MGP_WSBEiJ_P0071587	RRM_1	PF00076.22	2.3e-23	1	1
MGP_WSBEiJ_P0071588	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0071579	-	1982	-	MGP_WSBEiJ_P0071579	300 (aa)	-	-
MGP_WSBEiJ_T0071578	-	6743	XM_006534735	MGP_WSBEiJ_P0071578	349 (aa)	XP_006534798	Q60668
MGP_WSBEiJ_T0071582	-	1117	-	MGP_WSBEiJ_P0071582	215 (aa)	-	-
MGP_WSBEiJ_T0071583	-	737	-	MGP_WSBEiJ_P0071583	150 (aa)	-	-
MGP_WSBEiJ_T0071584	-	699	-	MGP_WSBEiJ_P0071584	131 (aa)	-	-
MGP_WSBEiJ_T0071585	-	1086	-	MGP_WSBEiJ_P0071585	80 (aa)	-	-
MGP_WSBEiJ_T0071586	-	425	-	-	- (aa)	-	-
MGP_WSBEiJ_T0071581	-	1519	-	MGP_WSBEiJ_P0071581	281 (aa)	-	-
MGP_WSBEiJ_T0071588	-	460	-	MGP_WSBEiJ_P0071588	25 (aa)	-	-
MGP_WSBEiJ_T0071587	-	475	-	MGP_WSBEiJ_P0071587	107 (aa)	-	-
MGP_WSBEiJ_T0071580	-	1652	-	MGP_WSBEiJ_P0071580	330 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0028968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0028968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0028968	Hnrnpd	71	33.333	MGP_WSBEiJ_G0019334	Slirp	70	33.333
MGP_WSBEiJ_G0028968	Hnrnpd	97	44.545	MGP_WSBEiJ_G0029908	Hnrnpa2b1	72	41.148
MGP_WSBEiJ_G0028968	Hnrnpd	100	68.000	MGP_WSBEiJ_G0029148	Msi1	59	49.485
MGP_WSBEiJ_G0028968	Hnrnpd	70	32.000	MGP_WSBEiJ_G0027657	Elavl2	62	30.864
MGP_WSBEiJ_G0028968	Hnrnpd	51	36.364	MGP_WSBEiJ_G0026201	Rbm38	51	36.364
MGP_WSBEiJ_G0028968	Hnrnpd	55	35.593	MGP_WSBEiJ_G0030144	Tia1	69	31.081
MGP_WSBEiJ_G0028968	Hnrnpd	100	80.000	MGP_WSBEiJ_G0028970	Hnrnpdl	89	64.236
MGP_WSBEiJ_G0028968	Hnrnpd	57	31.884	MGP_WSBEiJ_G0029273	Snrnp35	57	31.884
MGP_WSBEiJ_G0028968	Hnrnpd	100	72.000	MGP_WSBEiJ_G0018283	Msi2	100	53.982
MGP_WSBEiJ_G0028968	Hnrnpd	100	56.000	MGP_WSBEiJ_G0016882	Dazap1	98	41.935
MGP_WSBEiJ_G0028968	Hnrnpd	69	35.294	MGP_WSBEiJ_G0015450	Boll	61	31.818
MGP_WSBEiJ_G0028968	Hnrnpd	84	37.363	MGP_WSBEiJ_G0034856	Rbmx	85	43.750
MGP_WSBEiJ_G0028968	Hnrnpd	100	88.000	MGP_WSBEiJ_G0017632	Hnrnpab	88	62.799
MGP_WSBEiJ_G0028968	Hnrnpd	70	34.667	MGP_WSBEiJ_G0034647	Rbm3	80	36.709
MGP_WSBEiJ_G0028968	Hnrnpd	100	37.838	MGP_WSBEiJ_G0019952	Hnrnpa0	86	39.474
MGP_WSBEiJ_G0028968	Hnrnpd	100	64.000	MGP_WSBEiJ_G0028324	Tardbp	77	38.194
MGP_WSBEiJ_G0028968	Hnrnpd	84	36.559	MGP_WSBEiJ_G0016876	Cirbp	83	37.113