EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0028970 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 6080 bases
Position: chr5:100734130-100740209
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0071592	RRM_1	PF00076.22	2.3e-33	1	2
MGP_WSBEiJ_P0071592	RRM_1	PF00076.22	2.3e-33	2	2
MGP_WSBEiJ_P0071591	RRM_1	PF00076.22	5.2e-33	1	2
MGP_WSBEiJ_P0071591	RRM_1	PF00076.22	5.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0071593	-	2149	-	MGP_WSBEiJ_P0071593	420 (aa)	-	-
MGP_WSBEiJ_T0071592	-	2374	-	MGP_WSBEiJ_P0071592	322 (aa)	-	-
MGP_WSBEiJ_T0071591	-	2752	-	MGP_WSBEiJ_P0071591	420 (aa)	-	-
MGP_WSBEiJ_T0071590	-	1842	-	-	- (aa)	-	-
MGP_WSBEiJ_T0071596	-	846	-	-	- (aa)	-	-
MGP_WSBEiJ_T0071595	-	1477	-	MGP_WSBEiJ_P0071595	100 (aa)	-	-
MGP_WSBEiJ_T0071594	-	884	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0028970	Hnrnpdl	54	36.709	MGP_WSBEiJ_G0016876	Cirbp	73	36.709
MGP_WSBEiJ_G0028970	Hnrnpdl	58	38.542	MGP_WSBEiJ_G0029908	Hnrnpa2b1	58	38.824
MGP_WSBEiJ_G0028970	Hnrnpdl	78	41.634	MGP_WSBEiJ_G0018283	Msi2	100	54.867
MGP_WSBEiJ_G0028970	Hnrnpdl	89	57.292	MGP_WSBEiJ_G0017632	Hnrnpab	82	58.419
MGP_WSBEiJ_G0028970	Hnrnpdl	69	36.036	MGP_WSBEiJ_G0016882	Dazap1	99	39.881
MGP_WSBEiJ_G0028970	Hnrnpdl	64	30.000	MGP_WSBEiJ_G0028324	Tardbp	77	31.447
MGP_WSBEiJ_G0028970	Hnrnpdl	89	64.236	MGP_WSBEiJ_G0028968	Hnrnpd	100	80.000
MGP_WSBEiJ_G0028970	Hnrnpdl	51	34.706	MGP_WSBEiJ_G0019952	Hnrnpa0	56	34.706
MGP_WSBEiJ_G0028970	Hnrnpdl	75	39.676	MGP_WSBEiJ_G0029148	Msi1	58	48.052