EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0029273 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp35
Alias: 6330548G22Rik|U1snrnpbp
Full Name: small nuclear ribonucleoprotein 35 (U11/U12)
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 10322 bases
Position: chr5:127230464-127240785
Accession: 1923417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0073225	RRM_1	PF00076.22	1.1e-16	1	1
MGP_WSBEiJ_P0073224	RRM_1	PF00076.22	1.3e-16	1	1
MGP_WSBEiJ_P0073226	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0073226	-	1181	-	MGP_WSBEiJ_P0073226	244 (aa)	-	-
MGP_WSBEiJ_T0073225	-	449	-	MGP_WSBEiJ_P0073225	121 (aa)	-	-
MGP_WSBEiJ_T0073224	-	1115	XM_006530494	MGP_WSBEiJ_P0073224	244 (aa)	XP_006530557	Q9D384

Gene Model

Click here to download MGP_WSBEiJ_G0029273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0029273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0029273	Snrnp35	57	31.884	MGP_WSBEiJ_G0028968	Hnrnpd	57	31.884
MGP_WSBEiJ_G0029273	Snrnp35	61	48.649	MGP_WSBEiJ_G0031369	Snrnp70	70	46.667
MGP_WSBEiJ_G0029273	Snrnp35	55	34.848	MGP_WSBEiJ_G0034647	Rbm3	73	33.333
MGP_WSBEiJ_G0029273	Snrnp35	55	36.364	MGP_WSBEiJ_G0034856	Rbmx	71	35.616
MGP_WSBEiJ_G0029273	Snrnp35	60	37.500	MGP_WSBEiJ_G0027657	Elavl2	67	35.714
MGP_WSBEiJ_G0029273	Snrnp35	59	33.803	MGP_WSBEiJ_G0027789	Elavl4	57	37.037