EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0029537 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf4
Alias: 30kDa|C79664|Cpsf30
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 15340 bases
Position: chr5:149316837-149332176
Accession: 1861602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0074608	zf-CCCH	PF00642.24	1.1e-20	1	2
MGP_WSBEiJ_P0074608	zf-CCCH	PF00642.24	1.1e-20	2	2
MGP_WSBEiJ_P0074603	zf-CCCH	PF00642.24	3e-20	1	2
MGP_WSBEiJ_P0074603	zf-CCCH	PF00642.24	3e-20	2	2
MGP_WSBEiJ_P0074606	zf-CCCH	PF00642.24	3.1e-20	1	2
MGP_WSBEiJ_P0074606	zf-CCCH	PF00642.24	3.1e-20	2	2
MGP_WSBEiJ_P0074605	zf-CCCH	PF00642.24	5.8e-20	1	2
MGP_WSBEiJ_P0074605	zf-CCCH	PF00642.24	5.8e-20	2	2
MGP_WSBEiJ_P0074604	zf-CCCH	PF00642.24	2.4e-15	1	2
MGP_WSBEiJ_P0074604	zf-CCCH	PF00642.24	2.4e-15	2	2
MGP_WSBEiJ_P0074604	zf-CCHC	PF00098.23	5.5e-06	1	1
MGP_WSBEiJ_P0074603	zf-CCHC	PF00098.23	6.6e-06	1	1
MGP_WSBEiJ_P0074606	zf-CCHC	PF00098.23	6.6e-06	1	1
MGP_WSBEiJ_P0074605	zf-CCHC	PF00098.23	7.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0074608	-	850	-	MGP_WSBEiJ_P0074608	207 (aa)	-	-
MGP_WSBEiJ_T0074609	-	2985	-	-	- (aa)	-	-
MGP_WSBEiJ_T0074603	-	1728	XM_006504845	MGP_WSBEiJ_P0074603	243 (aa)	XP_006504908	Q8BQZ5
MGP_WSBEiJ_T0074604	-	1621	-	MGP_WSBEiJ_P0074604	211 (aa)	-	-
MGP_WSBEiJ_T0074605	-	1771	-	MGP_WSBEiJ_P0074605	269 (aa)	-	-
MGP_WSBEiJ_T0074606	-	1402	-	MGP_WSBEiJ_P0074606	244 (aa)	-	-
MGP_WSBEiJ_T0074607	-	1219	-	MGP_WSBEiJ_P0074607	62 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0029537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0029537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0029537	Cpsf4	86	52.358	MGP_WSBEiJ_G0018710	Cpsf4l	82	62.400