EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0029908 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 9682 bases
Position: chr6:49873774-49883455
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0076279	RRM_1	PF00076.22	3.2e-32	1	2
MGP_WSBEiJ_P0076279	RRM_1	PF00076.22	3.2e-32	2	2
MGP_WSBEiJ_P0076285	RRM_1	PF00076.22	3.2e-32	1	2
MGP_WSBEiJ_P0076285	RRM_1	PF00076.22	3.2e-32	2	2
MGP_WSBEiJ_P0076282	RRM_1	PF00076.22	4.9e-32	1	2
MGP_WSBEiJ_P0076282	RRM_1	PF00076.22	4.9e-32	2	2
MGP_WSBEiJ_P0076286	RRM_1	PF00076.22	4.9e-32	1	2
MGP_WSBEiJ_P0076286	RRM_1	PF00076.22	4.9e-32	2	2
MGP_WSBEiJ_P0076284	RRM_1	PF00076.22	5.5e-32	1	2
MGP_WSBEiJ_P0076284	RRM_1	PF00076.22	5.5e-32	2	2
MGP_WSBEiJ_P0076288	RRM_1	PF00076.22	1.8e-15	1	1
MGP_WSBEiJ_P0076288	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_WSBEiJ_P0076279	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_WSBEiJ_P0076285	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0076288	-	466	-	MGP_WSBEiJ_P0076288	154 (aa)	-	-
MGP_WSBEiJ_T0076289	-	709	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076286	-	1638	-	MGP_WSBEiJ_P0076286	341 (aa)	-	-
MGP_WSBEiJ_T0076287	-	766	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076284	-	1728	-	MGP_WSBEiJ_P0076284	353 (aa)	-	-
MGP_WSBEiJ_T0076285	-	1518	-	MGP_WSBEiJ_P0076285	301 (aa)	-	-
MGP_WSBEiJ_T0076282	-	1662	-	MGP_WSBEiJ_P0076282	341 (aa)	-	-
MGP_WSBEiJ_T0076283	-	1554	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076280	-	1703	-	MGP_WSBEiJ_P0076280	353 (aa)	-	-
MGP_WSBEiJ_T0076281	-	1542	-	MGP_WSBEiJ_P0076281	301 (aa)	-	-
MGP_WSBEiJ_T0076291	-	3652	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076290	-	599	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076279	-	1647	XM_006506373	MGP_WSBEiJ_P0076279	301 (aa)	XP_006506436	O88569

Gene Model

Click here to download MGP_WSBEiJ_G0029908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0029908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0029908	Hnrnpa2b1	66	30.348	MGP_WSBEiJ_G0028324	Tardbp	64	30.208
MGP_WSBEiJ_G0029908	Hnrnpa2b1	56	44.348	MGP_WSBEiJ_G0018283	Msi2	100	44.348
MGP_WSBEiJ_G0029908	Hnrnpa2b1	66	32.143	MGP_WSBEiJ_G0034019	Celf6	79	31.250
MGP_WSBEiJ_G0029908	Hnrnpa2b1	60	41.026	MGP_WSBEiJ_G0016882	Dazap1	99	40.237
MGP_WSBEiJ_G0029908	Hnrnpa2b1	58	38.824	MGP_WSBEiJ_G0028970	Hnrnpdl	58	38.542
MGP_WSBEiJ_G0029908	Hnrnpa2b1	91	31.034	MGP_WSBEiJ_G0034647	Rbm3	67	44.000
MGP_WSBEiJ_G0029908	Hnrnpa2b1	91	41.379	MGP_WSBEiJ_G0029148	Msi1	61	43.750
MGP_WSBEiJ_G0029908	Hnrnpa2b1	59	55.307	MGP_WSBEiJ_G0019952	Hnrnpa0	91	49.640
MGP_WSBEiJ_G0029908	Hnrnpa2b1	69	31.776	MGP_WSBEiJ_G0015450	Boll	64	33.333
MGP_WSBEiJ_G0029908	Hnrnpa2b1	56	38.554	MGP_WSBEiJ_G0034856	Rbmx	90	40.299
MGP_WSBEiJ_G0029908	Hnrnpa2b1	81	78.889	MGP_WSBEiJ_G0021744	Hnrnpa1	53	73.134
MGP_WSBEiJ_G0029908	Hnrnpa2b1	61	38.068	MGP_WSBEiJ_G0017632	Hnrnpab	64	37.368
MGP_WSBEiJ_G0029908	Hnrnpa2b1	72	41.148	MGP_WSBEiJ_G0028968	Hnrnpd	97	44.545
MGP_WSBEiJ_G0029908	Hnrnpa2b1	50	44.737	MGP_WSBEiJ_G0016876	Cirbp	70	44.737