EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0030001 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 76230 bases
Position: chr6:64343516-64419745
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0076609	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0076619	-	726	-	MGP_WSBEiJ_P0076619	45 (aa)	-	-
MGP_WSBEiJ_T0076618	-	635	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076615	-	2821	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076614	-	739	-	MGP_WSBEiJ_P0076614	73 (aa)	-	-
MGP_WSBEiJ_T0076617	-	655	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076616	-	4177	-	MGP_WSBEiJ_P0076616	123 (aa)	-	-
MGP_WSBEiJ_T0076611	-	600	-	MGP_WSBEiJ_P0076611	73 (aa)	-	-
MGP_WSBEiJ_T0076610	-	466	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076613	-	472	-	MGP_WSBEiJ_P0076613	68 (aa)	-	-
MGP_WSBEiJ_T0076612	-	734	-	MGP_WSBEiJ_P0076612	73 (aa)	-	-
MGP_WSBEiJ_T0076620	-	2758	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076621	-	643	-	-	- (aa)	-	-
MGP_WSBEiJ_T0076608	-	602	XM_006505509	MGP_WSBEiJ_P0076608	134 (aa)	XP_006505572	Q04692
MGP_WSBEiJ_T0076609	-	5166	-	MGP_WSBEiJ_P0076609	1021 (aa)	-	-
MGP_WSBEiJ_T0076622	-	2525	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0030001	Smarcad1	50	35.135	MGP_WSBEiJ_G0026878	Chd1l	51	35.135
MGP_WSBEiJ_G0030001	Smarcad1	51	37.705	MGP_WSBEiJ_G0024363	Hells	66	37.887
MGP_WSBEiJ_G0030001	Smarcad1	50	30.112	MGP_WSBEiJ_G0027827	Rad54l	66	30.112