EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0030144 (Gene tree)
Gene ID: -
Gene Symbol: Tia1
Alias: 2310050N03Rik|AI256674|TIA-1|Tia|mTIA-1
Full Name: cytotoxic granule-associated RNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 30559 bases
Position: chr6:87042041-87072599
Accession: 107914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0077315	RRM_1	PF00076.22	4.4e-68	1	3
MGP_WSBEiJ_P0077315	RRM_1	PF00076.22	4.4e-68	2	3
MGP_WSBEiJ_P0077315	RRM_1	PF00076.22	4.4e-68	3	3
MGP_WSBEiJ_P0077309	RRM_1	PF00076.22	1.9e-67	1	3
MGP_WSBEiJ_P0077309	RRM_1	PF00076.22	1.9e-67	2	3
MGP_WSBEiJ_P0077309	RRM_1	PF00076.22	1.9e-67	3	3
MGP_WSBEiJ_P0077301	RRM_1	PF00076.22	2.1e-67	1	3
MGP_WSBEiJ_P0077301	RRM_1	PF00076.22	2.1e-67	2	3
MGP_WSBEiJ_P0077301	RRM_1	PF00076.22	2.1e-67	3	3
MGP_WSBEiJ_P0077302	RRM_1	PF00076.22	2.1e-67	1	3
MGP_WSBEiJ_P0077302	RRM_1	PF00076.22	2.1e-67	2	3
MGP_WSBEiJ_P0077302	RRM_1	PF00076.22	2.1e-67	3	3
MGP_WSBEiJ_P0077310	RRM_1	PF00076.22	2.2e-58	1	3
MGP_WSBEiJ_P0077310	RRM_1	PF00076.22	2.2e-58	2	3
MGP_WSBEiJ_P0077310	RRM_1	PF00076.22	2.2e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0077328	-	597	-	MGP_WSBEiJ_P0077328	105 (aa)	-	-
MGP_WSBEiJ_T0077308	-	3855	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077323	-	628	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077304	-	422	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077305	-	4420	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077306	-	612	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077307	-	1203	-	MGP_WSBEiJ_P0077307	133 (aa)	-	-
MGP_WSBEiJ_T0077301	-	1789	XM_006505889	MGP_WSBEiJ_P0077301	385 (aa)	XP_006505952	P52912
MGP_WSBEiJ_T0077302	-	4476	-	MGP_WSBEiJ_P0077302	386 (aa)	-	-
MGP_WSBEiJ_T0077303	-	934	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077326	-	716	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077327	-	585	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077324	-	877	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077325	-	2577	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077322	-	759	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077309	-	3129	-	MGP_WSBEiJ_P0077309	375 (aa)	-	-
MGP_WSBEiJ_T0077320	-	706	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077321	-	750	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077317	-	823	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077316	-	864	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077315	-	3107	-	MGP_WSBEiJ_P0077315	377 (aa)	-	-
MGP_WSBEiJ_T0077314	-	1178	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077313	-	4325	-	MGP_WSBEiJ_P0077313	212 (aa)	-	-
MGP_WSBEiJ_T0077312	-	797	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077311	-	1290	-	MGP_WSBEiJ_P0077311	93 (aa)	-	-
MGP_WSBEiJ_T0077310	-	1444	-	MGP_WSBEiJ_P0077310	285 (aa)	-	-
MGP_WSBEiJ_T0077319	-	2660	-	-	- (aa)	-	-
MGP_WSBEiJ_T0077318	-	1947	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0030144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0030144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0030144	Tia1	87	38.095	MGP_WSBEiJ_G0026082	Pabpc1l	59	38.095
MGP_WSBEiJ_G0030144	Tia1	88	34.568	MGP_WSBEiJ_G0016950	Celf5	56	32.222
MGP_WSBEiJ_G0030144	Tia1	98	31.169	MGP_WSBEiJ_G0033593	Elavl3	90	37.179
MGP_WSBEiJ_G0030144	Tia1	98	32.895	MGP_WSBEiJ_G0027789	Elavl4	94	35.897
MGP_WSBEiJ_G0030144	Tia1	93	38.667	MGP_WSBEiJ_G0026790	Celf3	77	37.805
MGP_WSBEiJ_G0030144	Tia1	78	36.000	MGP_WSBEiJ_G0022029	Ncbp2	51	36.000
MGP_WSBEiJ_G0030144	Tia1	83	35.443	MGP_WSBEiJ_G0024598	Celf2	51	35.443
MGP_WSBEiJ_G0030144	Tia1	86	39.394	MGP_WSBEiJ_G0027947	-	98	39.394
MGP_WSBEiJ_G0030144	Tia1	96	36.905	MGP_WSBEiJ_G0022441	Pabpc6	58	36.905
MGP_WSBEiJ_G0030144	Tia1	85	36.000	MGP_WSBEiJ_G0034019	Celf6	62	32.955
MGP_WSBEiJ_G0030144	Tia1	87	32.911	MGP_WSBEiJ_G0023480	Celf4	63	30.682
MGP_WSBEiJ_G0030144	Tia1	95	30.000	MGP_WSBEiJ_G0026432	Pabpc4l	95	30.539
MGP_WSBEiJ_G0030144	Tia1	77	35.870	MGP_WSBEiJ_G0026861	Rbm8a	54	35.870
MGP_WSBEiJ_G0030144	Tia1	60	31.285	MGP_WSBEiJ_G0028077	Trnau1ap	79	30.198
MGP_WSBEiJ_G0030144	Tia1	73	35.366	MGP_WSBEiJ_G0016249	Rbm8a2	53	35.870
MGP_WSBEiJ_G0030144	Tia1	69	31.081	MGP_WSBEiJ_G0028968	Hnrnpd	55	35.593
MGP_WSBEiJ_G0030144	Tia1	80	37.778	MGP_WSBEiJ_G0016876	Cirbp	91	35.714
MGP_WSBEiJ_G0030144	Tia1	99	31.579	MGP_WSBEiJ_G0032466	Elavl1	95	32.298
MGP_WSBEiJ_G0030144	Tia1	95	33.835	MGP_WSBEiJ_G0023640	Pabpc2	57	35.443
MGP_WSBEiJ_G0030144	Tia1	80	34.043	MGP_WSBEiJ_G0034856	Rbmx	98	34.409
MGP_WSBEiJ_G0030144	Tia1	97	86.992	MGP_WSBEiJ_G0032221	Tial1	100	87.440
MGP_WSBEiJ_G0030144	Tia1	94	31.034	MGP_WSBEiJ_G0034225	Syncrip	57	32.143
MGP_WSBEiJ_G0030144	Tia1	71	40.260	MGP_WSBEiJ_G0034647	Rbm3	99	35.955
MGP_WSBEiJ_G0030144	Tia1	95	33.333	MGP_WSBEiJ_G0017782	-	80	34.524
MGP_WSBEiJ_G0030144	Tia1	84	34.247	MGP_WSBEiJ_G0035146	Pabpc5	93	33.333
MGP_WSBEiJ_G0030144	Tia1	95	30.189	MGP_WSBEiJ_G0021110	Pabpc1	86	38.095
MGP_WSBEiJ_G0030144	Tia1	89	34.615	MGP_WSBEiJ_G0027657	Elavl2	96	34.615