EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0030174 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 49390 bases
Position: chr6:88710351-88759740
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0077463	MMR_HSR1	PF01926.23	7e-07	1	1
MGP_WSBEiJ_P0077464	MMR_HSR1	PF01926.23	7.6e-07	1	1
MGP_WSBEiJ_P0077465	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0077463	-	1361	-	MGP_WSBEiJ_P0077463	207 (aa)	-	P51150
MGP_WSBEiJ_T0077465	-	372	-	MGP_WSBEiJ_P0077465	79 (aa)	-	-
MGP_WSBEiJ_T0077464	-	550	-	MGP_WSBEiJ_P0077464	98 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0030174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0030174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0030174	Rab7	83	35.714	MGP_WSBEiJ_G0018564	Arl4d	58	32.520
MGP_WSBEiJ_G0030174	Rab7	100	44.304	MGP_WSBEiJ_G0019212	Rab15	81	33.520
MGP_WSBEiJ_G0030174	Rab7	99	47.436	MGP_WSBEiJ_G0023158	Rab5a	81	40.782
MGP_WSBEiJ_G0030174	Rab7	90	50.704	MGP_WSBEiJ_G0031718	Rab6a	94	36.000
MGP_WSBEiJ_G0030174	Rab7	91	46.067	MGP_WSBEiJ_G0020607	Rab2b	91	36.634
MGP_WSBEiJ_G0030174	Rab7	90	49.296	MGP_WSBEiJ_G0026208	Rab22a	82	40.854
MGP_WSBEiJ_G0030174	Rab7	91	40.449	MGP_WSBEiJ_G0021547	Rabl2	71	33.735
MGP_WSBEiJ_G0030174	Rab7	94	43.478	MGP_WSBEiJ_G0015316	Rab23	70	33.918
MGP_WSBEiJ_G0030174	Rab7	91	48.611	MGP_WSBEiJ_G0029154	Rab35	95	34.872
MGP_WSBEiJ_G0030174	Rab7	91	45.833	MGP_WSBEiJ_G0031658	Rab30	88	38.043
MGP_WSBEiJ_G0030174	Rab7	95	37.333	MGP_WSBEiJ_G0018918	Dnajc27	60	36.145
MGP_WSBEiJ_G0030174	Rab7	91	44.944	MGP_WSBEiJ_G0026643	Rab25	75	39.157
MGP_WSBEiJ_G0030174	Rab7	97	63.636	MGP_WSBEiJ_G0035208	Rab9b	99	53.202
MGP_WSBEiJ_G0030174	Rab7	90	50.704	MGP_WSBEiJ_G0034308	Rab6b	94	36.683
MGP_WSBEiJ_G0030174	Rab7	100	39.241	MGP_WSBEiJ_G0017434	Rab1a	78	39.264
MGP_WSBEiJ_G0030174	Rab7	100	39.241	MGP_WSBEiJ_G0023961	Rab1b	97	34.848
MGP_WSBEiJ_G0030174	Rab7	91	45.833	MGP_WSBEiJ_G0022822	Rab11b	89	38.686
MGP_WSBEiJ_G0030174	Rab7	100	40.000	MGP_WSBEiJ_G0026440	Rab33b	79	36.559
MGP_WSBEiJ_G0030174	Rab7	79	31.169	MGP_WSBEiJ_G0034284	Mras	80	33.333
MGP_WSBEiJ_G0030174	Rab7	66	32.117	MGP_WSBEiJ_G0032352	Hras	96	30.808
MGP_WSBEiJ_G0030174	Rab7	90	40.278	MGP_WSBEiJ_G0034966	Rab39b	76	34.545
MGP_WSBEiJ_G0030174	Rab7	73	33.113	MGP_WSBEiJ_G0026926	Nras	95	33.108
MGP_WSBEiJ_G0030174	Rab7	97	35.789	MGP_WSBEiJ_G0030748	Rasl2-9	75	33.728
MGP_WSBEiJ_G0030174	Rab7	91	45.833	MGP_WSBEiJ_G0034060	Rab11a	87	38.686
MGP_WSBEiJ_G0030174	Rab7	91	45.833	MGP_WSBEiJ_G0016745	Rab36	63	36.571
MGP_WSBEiJ_G0030174	Rab7	91	43.836	MGP_WSBEiJ_G0034802	Rab33a	85	36.111
MGP_WSBEiJ_G0030174	Rab7	90	49.296	MGP_WSBEiJ_G0018521	Rab5c	77	42.442
MGP_WSBEiJ_G0030174	Rab7	95	53.947	MGP_WSBEiJ_G0018727	Rab37	76	41.071
MGP_WSBEiJ_G0030174	Rab7	90	48.864	MGP_WSBEiJ_G0023404	Rab18	92	36.082
MGP_WSBEiJ_G0030174	Rab7	91	45.833	MGP_WSBEiJ_G0024915	Rab14	74	38.415
MGP_WSBEiJ_G0030174	Rab7	76	33.121	MGP_WSBEiJ_G0030644	Kras	87	33.929
MGP_WSBEiJ_G0030174	Rab7	90	50.704	MGP_WSBEiJ_G0023259	Rab12	64	36.316
MGP_WSBEiJ_G0030174	Rab7	90	50.704	MGP_WSBEiJ_G0023250	Rab31	82	44.512