EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_WSBEiJ_G0030398 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_wsbeij
Status
putative
Strand
Minus strand
Length
29738 bases
Position
chr6:124459634-124489371
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_WSBEiJ_P0078650APOBEC_NPF08210.118.2e-3011
MGP_WSBEiJ_P0078651APOBEC_NPF08210.118.2e-3011
MGP_WSBEiJ_P0078652APOBEC_NPF08210.118.2e-3011
MGP_WSBEiJ_P0078653APOBEC_NPF08210.114.1e-1711
MGP_WSBEiJ_P0078654APOBEC_NPF08210.113.1e-1311
MGP_WSBEiJ_P0078650APOBEC_CPF05240.141.8e-2211
MGP_WSBEiJ_P0078651APOBEC_CPF05240.141.8e-2211
MGP_WSBEiJ_P0078652APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_WSBEiJ_T0078653-666-MGP_WSBEiJ_P0078653121 (aa)--
MGP_WSBEiJ_T0078652-2129-MGP_WSBEiJ_P0078652229 (aa)--
MGP_WSBEiJ_T0078651-2074-MGP_WSBEiJ_P0078651229 (aa)--
MGP_WSBEiJ_T0078650-2267XM_006505401MGP_WSBEiJ_P0078650229 (aa)XP_006505464P51908
MGP_WSBEiJ_T0078657-560--- (aa)--
MGP_WSBEiJ_T0078656-360-MGP_WSBEiJ_P007865625 (aa)--
MGP_WSBEiJ_T0078655-372-MGP_WSBEiJ_P007865543 (aa)--
MGP_WSBEiJ_T0078654-775-MGP_WSBEiJ_P0078654113 (aa)--
MGP_WSBEiJ_T0078658-520--- (aa)--
Gene Model
Click here to download MGP_WSBEiJ_G0030398's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0030398's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_WSBEiJ_G0030398Apobec17435.789MGP_WSBEiJ_G0021400Apobec39635.366
MGP_WSBEiJ_G0030398Apobec15639.706MGP_WSBEiJ_G0030397Aicda5341.509

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