EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0031050 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 12884 bases
Position: chr7:25685429-25698312
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0081129	RRM_5	PF13893.6	5.4e-07	1	2
MGP_WSBEiJ_P0081129	RRM_5	PF13893.6	5.4e-07	2	2
MGP_WSBEiJ_P0081130	RRM_5	PF13893.6	5.4e-07	1	2
MGP_WSBEiJ_P0081130	RRM_5	PF13893.6	5.4e-07	2	2
MGP_WSBEiJ_P0081131	RRM_5	PF13893.6	5.4e-07	1	2
MGP_WSBEiJ_P0081131	RRM_5	PF13893.6	5.4e-07	2	2
MGP_WSBEiJ_P0081129	RRM_1	PF00076.22	4.5e-28	1	2
MGP_WSBEiJ_P0081129	RRM_1	PF00076.22	4.5e-28	2	2
MGP_WSBEiJ_P0081130	RRM_1	PF00076.22	4.5e-28	1	2
MGP_WSBEiJ_P0081130	RRM_1	PF00076.22	4.5e-28	2	2
MGP_WSBEiJ_P0081131	RRM_1	PF00076.22	4.5e-28	1	2
MGP_WSBEiJ_P0081131	RRM_1	PF00076.22	4.5e-28	2	2
MGP_WSBEiJ_P0081132	RRM_1	PF00076.22	1.1e-18	1	2
MGP_WSBEiJ_P0081132	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0081132	-	968	-	MGP_WSBEiJ_P0081132	247 (aa)	-	-
MGP_WSBEiJ_T0081133	-	510	-	MGP_WSBEiJ_P0081133	44 (aa)	-	-
MGP_WSBEiJ_T0081130	-	1340	-	MGP_WSBEiJ_P0081130	287 (aa)	-	-
MGP_WSBEiJ_T0081131	-	1369	-	MGP_WSBEiJ_P0081131	287 (aa)	-	-
MGP_WSBEiJ_T0081129	-	1292	-	MGP_WSBEiJ_P0081129	287 (aa)	-	-
MGP_WSBEiJ_T0081128	-	513	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081134	-	1690	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0031050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0031050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0031050	Snrpa	97	55.235	MGP_WSBEiJ_G0025827	Snrpb2	99	63.121
MGP_WSBEiJ_G0031050	Snrpa	70	89.000	MGP_WSBEiJ_G0034298	Gm5145	100	89.000