EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0031110 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 13695 bases
Position: chr7:27500698-27514392
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0081349	RRM_5	PF13893.6	2.3e-60	1	2
MGP_WSBEiJ_P0081349	RRM_5	PF13893.6	2.3e-60	2	2
MGP_WSBEiJ_P0081353	RRM_5	PF13893.6	2.3e-60	1	2
MGP_WSBEiJ_P0081353	RRM_5	PF13893.6	2.3e-60	2	2
MGP_WSBEiJ_P0081354	RRM_5	PF13893.6	2.9e-60	1	2
MGP_WSBEiJ_P0081354	RRM_5	PF13893.6	2.9e-60	2	2
MGP_WSBEiJ_P0081351	RRM_5	PF13893.6	1.9e-59	1	2
MGP_WSBEiJ_P0081351	RRM_5	PF13893.6	1.9e-59	2	2
MGP_WSBEiJ_P0081349	RRM_1	PF00076.22	3.2e-22	1	2
MGP_WSBEiJ_P0081349	RRM_1	PF00076.22	3.2e-22	2	2
MGP_WSBEiJ_P0081353	RRM_1	PF00076.22	3.2e-22	1	2
MGP_WSBEiJ_P0081353	RRM_1	PF00076.22	3.2e-22	2	2
MGP_WSBEiJ_P0081354	RRM_1	PF00076.22	4.1e-22	1	2
MGP_WSBEiJ_P0081354	RRM_1	PF00076.22	4.1e-22	2	2
MGP_WSBEiJ_P0081351	RRM_1	PF00076.22	1.6e-16	1	1
MGP_WSBEiJ_P0081352	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0081356	-	1856	-	MGP_WSBEiJ_P0081356	201 (aa)	-	-
MGP_WSBEiJ_T0081358	-	631	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081359	-	1087	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081352	-	502	-	MGP_WSBEiJ_P0081352	112 (aa)	-	-
MGP_WSBEiJ_T0081353	-	2148	-	MGP_WSBEiJ_P0081353	586 (aa)	-	-
MGP_WSBEiJ_T0081350	-	2274	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081351	-	1904	-	MGP_WSBEiJ_P0081351	456 (aa)	-	-
MGP_WSBEiJ_T0081349	-	2685	XM_006539556	MGP_WSBEiJ_P0081349	586 (aa)	XP_006539619	Q8R081
MGP_WSBEiJ_T0081357	-	504	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081354	-	2186	-	MGP_WSBEiJ_P0081354	614 (aa)	-	-
MGP_WSBEiJ_T0081355	-	2425	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081360	-	768	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081361	-	678	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0031110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0031110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0031110	Hnrnpl	55	36.207	MGP_WSBEiJ_G0027553	Ptbp3	83	35.537
MGP_WSBEiJ_G0031110	Hnrnpl	77	30.645	MGP_WSBEiJ_G0027063	Ptbp2	77	30.645
MGP_WSBEiJ_G0031110	Hnrnpl	100	63.393	MGP_WSBEiJ_G0023325	Hnrnpll	79	58.065