EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0031137 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 17500 bases
Position: chr7:28649242-28666741
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_WSBEiJ_P0081485	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_WSBEiJ_P0081488	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_WSBEiJ_P0081485	zf-met	PF12874.7	8.2e-08	1	1
MGP_WSBEiJ_P0081488	zf-met	PF12874.7	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0081486	-	689	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081487	-	2982	-	-	- (aa)	-	-
MGP_WSBEiJ_T0081485	-	2540	XM_006539873	MGP_WSBEiJ_P0081485	578 (aa)	XP_006539936	Q7TMN8
MGP_WSBEiJ_T0081488	-	2747	-	MGP_WSBEiJ_P0081488	578 (aa)	-	-
MGP_WSBEiJ_T0081489	-	767	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0031137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0031137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0031137	Zfp420	99	38.393	MGP_WSBEiJ_G0033042	Zfp423	97	38.393
MGP_WSBEiJ_G0031137	Zfp420	98	46.711	MGP_WSBEiJ_G0029875	Repin1	93	46.711
MGP_WSBEiJ_G0031137	Zfp420	97	44.706	MGP_WSBEiJ_G0028256	Zbtb17	69	44.706
MGP_WSBEiJ_G0031137	Zfp420	99	47.059	MGP_WSBEiJ_G0023871	Zfp236	79	47.059
MGP_WSBEiJ_G0031137	Zfp420	99	56.327	MGP_WSBEiJ_G0017627	Zfp354a	77	53.403
MGP_WSBEiJ_G0031137	Zfp420	98	59.532	MGP_WSBEiJ_G0017621	Zfp454	71	57.803
MGP_WSBEiJ_G0031137	Zfp420	99	56.356	MGP_WSBEiJ_G0030971	Zfp61	59	56.356
MGP_WSBEiJ_G0031137	Zfp420	98	50.000	MGP_WSBEiJ_G0032895	Zfp882	85	50.000
MGP_WSBEiJ_G0031137	Zfp420	100	54.104	MGP_WSBEiJ_G0032894	Zfp709	84	54.310
MGP_WSBEiJ_G0031137	Zfp420	97	56.897	MGP_WSBEiJ_G0030348	Zfp637	75	54.167
MGP_WSBEiJ_G0031137	Zfp420	99	52.489	MGP_WSBEiJ_G0026141	Zfp334	75	52.489
MGP_WSBEiJ_G0031137	Zfp420	98	48.507	MGP_WSBEiJ_G0029029	Gfi1	100	48.507
MGP_WSBEiJ_G0031137	Zfp420	99	37.634	MGP_WSBEiJ_G0030738	Zfp865	80	37.634
MGP_WSBEiJ_G0031137	Zfp420	95	30.691	MGP_WSBEiJ_G0030739	-	66	31.343
MGP_WSBEiJ_G0031137	Zfp420	98	38.136	MGP_WSBEiJ_G0030730	Zfp628	60	38.748
MGP_WSBEiJ_G0031137	Zfp420	99	51.196	MGP_WSBEiJ_G0020024	Zfp759	88	50.364
MGP_WSBEiJ_G0031137	Zfp420	97	41.080	MGP_WSBEiJ_G0022552	Zscan10	78	40.179
MGP_WSBEiJ_G0031137	Zfp420	99	51.052	MGP_WSBEiJ_G0031267	Zfp715	71	51.316
MGP_WSBEiJ_G0031137	Zfp420	99	57.692	MGP_WSBEiJ_G0033271	Zfp1	78	57.692
MGP_WSBEiJ_G0031137	Zfp420	99	60.656	MGP_WSBEiJ_G0021323	Zfp251	76	60.656
MGP_WSBEiJ_G0031137	Zfp420	99	49.905	MGP_WSBEiJ_G0022547	Zfp945	97	50.469
MGP_WSBEiJ_G0031137	Zfp420	99	36.677	MGP_WSBEiJ_G0031001	Zfp574	93	37.533
MGP_WSBEiJ_G0031137	Zfp420	99	57.095	MGP_WSBEiJ_G0030972	Zfp94	82	57.095
MGP_WSBEiJ_G0031137	Zfp420	98	48.744	MGP_WSBEiJ_G0028696	Zbtb49	89	50.000
MGP_WSBEiJ_G0031137	Zfp420	98	49.524	MGP_WSBEiJ_G0017713	Zfp672	89	49.524
MGP_WSBEiJ_G0031137	Zfp420	98	56.275	MGP_WSBEiJ_G0020023	Rslcan18	71	56.275
MGP_WSBEiJ_G0031137	Zfp420	98	56.182	MGP_WSBEiJ_G0020042	Zfp748	92	56.182
MGP_WSBEiJ_G0031137	Zfp420	98	50.120	MGP_WSBEiJ_G0031074	Zfp974	96	50.120
MGP_WSBEiJ_G0031137	Zfp420	99	53.947	MGP_WSBEiJ_G0033600	Zfp872	87	53.947
MGP_WSBEiJ_G0031137	Zfp420	99	56.553	MGP_WSBEiJ_G0030965	Zfp235	72	56.553
MGP_WSBEiJ_G0031137	Zfp420	98	53.074	MGP_WSBEiJ_G0030964	Zfp112	57	53.074
MGP_WSBEiJ_G0031137	Zfp420	98	51.882	MGP_WSBEiJ_G0017760	Zfp867	82	51.882
MGP_WSBEiJ_G0031137	Zfp420	98	37.309	MGP_WSBEiJ_G0033112	Zfp319	93	36.919
MGP_WSBEiJ_G0031137	Zfp420	98	55.210	MGP_WSBEiJ_G0022528	Zfp51	88	55.210
MGP_WSBEiJ_G0031137	Zfp420	98	54.648	MGP_WSBEiJ_G0022526	Zfp677	89	54.648
MGP_WSBEiJ_G0031137	Zfp420	95	59.426	MGP_WSBEiJ_G0025717	Zfp661	72	59.426
MGP_WSBEiJ_G0031137	Zfp420	98	39.286	MGP_WSBEiJ_G0026179	Zfp64	69	36.504
MGP_WSBEiJ_G0031137	Zfp420	97	48.387	MGP_WSBEiJ_G0030006	Prdm5	91	48.387
MGP_WSBEiJ_G0031137	Zfp420	98	47.967	MGP_WSBEiJ_G0032173	E430018J23Rik	90	47.967
MGP_WSBEiJ_G0031137	Zfp420	99	56.115	MGP_WSBEiJ_G0032171	Zfp768	51	56.071