EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0031658 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 89928 bases
Position: chr7:95110110-95200037
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0083642	MMR_HSR1	PF01926.23	2.3e-05	1	1
MGP_WSBEiJ_P0083643	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0083642	-	2038	XM_006508293	MGP_WSBEiJ_P0083642	203 (aa)	XP_006508356	Q923S9
MGP_WSBEiJ_T0083643	-	1406	-	MGP_WSBEiJ_P0083643	203 (aa)	-	-
MGP_WSBEiJ_T0083644	-	1304	-	MGP_WSBEiJ_P0083644	175 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0031658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0031658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0031658	Rab30	82	31.737	MGP_WSBEiJ_G0028545	Rheb	88	31.737
MGP_WSBEiJ_G0031658	Rab30	84	45.614	MGP_WSBEiJ_G0020607	Rab2b	81	48.718
MGP_WSBEiJ_G0031658	Rab30	83	47.929	MGP_WSBEiJ_G0023404	Rab18	82	47.929
MGP_WSBEiJ_G0031658	Rab30	97	39.524	MGP_WSBEiJ_G0022822	Rab11b	93	44.604
MGP_WSBEiJ_G0031658	Rab30	77	35.625	MGP_WSBEiJ_G0018128	Rab34	62	35.625
MGP_WSBEiJ_G0031658	Rab30	78	38.272	MGP_WSBEiJ_G0016745	Rab36	61	38.272
MGP_WSBEiJ_G0031658	Rab30	78	48.447	MGP_WSBEiJ_G0034966	Rab39b	76	48.447
MGP_WSBEiJ_G0031658	Rab30	84	34.503	MGP_WSBEiJ_G0026926	Nras	96	34.932
MGP_WSBEiJ_G0031658	Rab30	88	38.043	MGP_WSBEiJ_G0030174	Rab7	91	45.833
MGP_WSBEiJ_G0031658	Rab30	76	42.857	MGP_WSBEiJ_G0023250	Rab31	79	42.857
MGP_WSBEiJ_G0031658	Rab30	88	47.778	MGP_WSBEiJ_G0023259	Rab12	62	47.778
MGP_WSBEiJ_G0031658	Rab30	87	33.146	MGP_WSBEiJ_G0030644	Kras	93	33.146
MGP_WSBEiJ_G0031658	Rab30	79	42.236	MGP_WSBEiJ_G0026208	Rab22a	83	42.236
MGP_WSBEiJ_G0031658	Rab30	79	34.756	MGP_WSBEiJ_G0021547	Rabl2	70	34.756
MGP_WSBEiJ_G0031658	Rab30	86	43.678	MGP_WSBEiJ_G0023158	Rab5a	81	43.678
MGP_WSBEiJ_G0031658	Rab30	82	50.000	MGP_WSBEiJ_G0023961	Rab1b	83	50.000
MGP_WSBEiJ_G0031658	Rab30	97	37.981	MGP_WSBEiJ_G0034060	Rab11a	91	44.604
MGP_WSBEiJ_G0031658	Rab30	89	34.426	MGP_WSBEiJ_G0032352	Hras	94	34.426
MGP_WSBEiJ_G0031658	Rab30	79	39.157	MGP_WSBEiJ_G0035208	Rab9b	82	39.157
MGP_WSBEiJ_G0031658	Rab30	79	41.615	MGP_WSBEiJ_G0034308	Rab6b	77	41.615
MGP_WSBEiJ_G0031658	Rab30	87	37.500	MGP_WSBEiJ_G0015316	Rab23	74	37.500
MGP_WSBEiJ_G0031658	Rab30	82	50.602	MGP_WSBEiJ_G0017434	Rab1a	81	50.602
MGP_WSBEiJ_G0031658	Rab30	89	40.556	MGP_WSBEiJ_G0024915	Rab14	84	40.556
MGP_WSBEiJ_G0031658	Rab30	79	42.857	MGP_WSBEiJ_G0031718	Rab6a	77	42.857
MGP_WSBEiJ_G0031658	Rab30	81	32.317	MGP_WSBEiJ_G0030748	Rasl2-9	75	32.317
MGP_WSBEiJ_G0031658	Rab30	83	42.012	MGP_WSBEiJ_G0018521	Rab5c	78	42.012
MGP_WSBEiJ_G0031658	Rab30	81	47.059	MGP_WSBEiJ_G0026440	Rab33b	74	47.059
MGP_WSBEiJ_G0031658	Rab30	86	42.529	MGP_WSBEiJ_G0019212	Rab15	82	42.529
MGP_WSBEiJ_G0031658	Rab30	81	33.735	MGP_WSBEiJ_G0034284	Mras	79	33.735
MGP_WSBEiJ_G0031658	Rab30	86	50.286	MGP_WSBEiJ_G0029154	Rab35	86	50.286
MGP_WSBEiJ_G0031658	Rab30	97	41.546	MGP_WSBEiJ_G0026643	Rab25	96	41.546
MGP_WSBEiJ_G0031658	Rab30	80	48.466	MGP_WSBEiJ_G0018727	Rab37	75	48.466
MGP_WSBEiJ_G0031658	Rab30	81	50.588	MGP_WSBEiJ_G0034802	Rab33a	72	50.588