EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0031718 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 37467 bases
Position: chr7:103261056-103298522
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0083897	MMR_HSR1	PF01926.23	9e-05	1	1
MGP_WSBEiJ_P0083898	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0083899	-	567	-	-	- (aa)	-	-
MGP_WSBEiJ_T0083898	-	3111	-	MGP_WSBEiJ_P0083898	208 (aa)	-	-
MGP_WSBEiJ_T0083897	-	3215	-	MGP_WSBEiJ_P0083897	208 (aa)	-	-
MGP_WSBEiJ_T0083896	-	2618	-	MGP_WSBEiJ_P0083896	175 (aa)	-	P35279

Gene Model

Click here to download MGP_WSBEiJ_G0031718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0031718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0031718	Rab6a	74	39.610	MGP_WSBEiJ_G0029154	Rab35	89	35.789
MGP_WSBEiJ_G0031718	Rab6a	79	33.721	MGP_WSBEiJ_G0035208	Rab9b	84	33.721
MGP_WSBEiJ_G0031718	Rab6a	77	30.769	MGP_WSBEiJ_G0029555	Rasl11a	69	30.769
MGP_WSBEiJ_G0031718	Rab6a	94	38.384	MGP_WSBEiJ_G0017434	Rab1a	94	38.384
MGP_WSBEiJ_G0031718	Rab6a	77	40.828	MGP_WSBEiJ_G0020607	Rab2b	79	43.421
MGP_WSBEiJ_G0031718	Rab6a	77	42.857	MGP_WSBEiJ_G0018727	Rab37	75	42.857
MGP_WSBEiJ_G0031718	Rab6a	77	42.857	MGP_WSBEiJ_G0031658	Rab30	79	42.857
MGP_WSBEiJ_G0031718	Rab6a	81	39.053	MGP_WSBEiJ_G0026208	Rab22a	87	39.053
MGP_WSBEiJ_G0031718	Rab6a	95	30.151	MGP_WSBEiJ_G0032352	Hras	98	30.151
MGP_WSBEiJ_G0031718	Rab6a	85	37.634	MGP_WSBEiJ_G0018128	Rab34	72	37.634
MGP_WSBEiJ_G0031718	Rab6a	75	35.625	MGP_WSBEiJ_G0028545	Rheb	85	35.625
MGP_WSBEiJ_G0031718	Rab6a	76	39.873	MGP_WSBEiJ_G0015316	Rab23	66	39.873
MGP_WSBEiJ_G0031718	Rab6a	88	34.239	MGP_WSBEiJ_G0026643	Rab25	86	34.239
MGP_WSBEiJ_G0031718	Rab6a	90	36.458	MGP_WSBEiJ_G0019212	Rab15	91	36.458
MGP_WSBEiJ_G0031718	Rab6a	98	41.546	MGP_WSBEiJ_G0023158	Rab5a	95	41.546
MGP_WSBEiJ_G0031718	Rab6a	75	38.217	MGP_WSBEiJ_G0022822	Rab11b	91	37.778
MGP_WSBEiJ_G0031718	Rab6a	75	32.911	MGP_WSBEiJ_G0026926	Nras	98	33.557
MGP_WSBEiJ_G0031718	Rab6a	94	36.150	MGP_WSBEiJ_G0016745	Rab36	80	36.150
MGP_WSBEiJ_G0031718	Rab6a	75	39.623	MGP_WSBEiJ_G0034966	Rab39b	75	39.623
MGP_WSBEiJ_G0031718	Rab6a	88	31.915	MGP_WSBEiJ_G0021547	Rabl2	83	31.915
MGP_WSBEiJ_G0031718	Rab6a	76	32.500	MGP_WSBEiJ_G0034284	Mras	76	32.500
MGP_WSBEiJ_G0031718	Rab6a	84	44.000	MGP_WSBEiJ_G0018521	Rab5c	81	44.000
MGP_WSBEiJ_G0031718	Rab6a	75	32.278	MGP_WSBEiJ_G0030644	Kras	83	32.278
MGP_WSBEiJ_G0031718	Rab6a	100	90.865	MGP_WSBEiJ_G0034308	Rab6b	100	90.865
MGP_WSBEiJ_G0031718	Rab6a	94	36.000	MGP_WSBEiJ_G0030174	Rab7	90	50.704
MGP_WSBEiJ_G0031718	Rab6a	80	38.922	MGP_WSBEiJ_G0023250	Rab31	86	38.922
MGP_WSBEiJ_G0031718	Rab6a	76	40.252	MGP_WSBEiJ_G0023259	Rab12	55	40.252
MGP_WSBEiJ_G0031718	Rab6a	95	37.561	MGP_WSBEiJ_G0034802	Rab33a	86	37.561
MGP_WSBEiJ_G0031718	Rab6a	94	35.784	MGP_WSBEiJ_G0026440	Rab33b	86	35.784
MGP_WSBEiJ_G0031718	Rab6a	93	38.384	MGP_WSBEiJ_G0023961	Rab1b	96	38.384
MGP_WSBEiJ_G0031718	Rab6a	95	36.634	MGP_WSBEiJ_G0023404	Rab18	94	36.634
MGP_WSBEiJ_G0031718	Rab6a	84	35.955	MGP_WSBEiJ_G0034060	Rab11a	84	38.281
MGP_WSBEiJ_G0031718	Rab6a	94	36.232	MGP_WSBEiJ_G0024915	Rab14	95	36.232
MGP_WSBEiJ_G0031718	Rab6a	56	30.000	MGP_WSBEiJ_G0018564	Arl4d	58	30.000