EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0032098 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 71308 bases
Position: chr7:127019704-127091011
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0084980	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_WSBEiJ_P0084977	Ago_hook	PF10427.9	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0084979	-	1783	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084978	-	3577	-	MGP_WSBEiJ_P0084978	35 (aa)	-	-
MGP_WSBEiJ_T0084982	-	939	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084983	-	606	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084984	-	463	-	MGP_WSBEiJ_P0084984	154 (aa)	-	-
MGP_WSBEiJ_T0084985	-	3297	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084981	-	4312	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084975	-	640	-	-	- (aa)	-	-
MGP_WSBEiJ_T0084977	-	8116	-	MGP_WSBEiJ_P0084977	1880 (aa)	-	-
MGP_WSBEiJ_T0084976	-	310	-	MGP_WSBEiJ_P0084976	53 (aa)	-	-
MGP_WSBEiJ_T0084980	-	5204	-	MGP_WSBEiJ_P0084980	1397 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0032098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0032098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0032098	Tnrc6a	99	38.260	MGP_WSBEiJ_G0021414	Tnrc6b	98	37.120
MGP_WSBEiJ_G0032098	Tnrc6a	98	44.685	MGP_WSBEiJ_G0018803	Tnrc6c	99	40.570