EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0032165 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 20965 bases
Position: chr7:131284914-131305878
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0085386	MMR_HSR1	PF01926.23	1.9e-08	1	1
MGP_WSBEiJ_P0085385	MMR_HSR1	PF01926.23	3.3e-08	1	1
MGP_WSBEiJ_P0085383	MMR_HSR1	PF01926.23	4.9e-08	1	1
MGP_WSBEiJ_P0085381	MMR_HSR1	PF01926.23	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0085385	-	706	-	MGP_WSBEiJ_P0085385	186 (aa)	-	-
MGP_WSBEiJ_T0085384	-	789	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085387	-	821	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085386	-	599	-	MGP_WSBEiJ_P0085386	145 (aa)	-	-
MGP_WSBEiJ_T0085381	-	1416	XM_006508029	MGP_WSBEiJ_P0085381	366 (aa)	XP_006508092	P42209
MGP_WSBEiJ_T0085383	-	1048	-	MGP_WSBEiJ_P0085383	328 (aa)	-	-
MGP_WSBEiJ_T0085382	-	574	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085389	-	709	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085388	-	242	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0032165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0032165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0032165	Sept1	100	43.537	MGP_WSBEiJ_G0016649	Sept10	71	40.064
MGP_WSBEiJ_G0032165	Sept1	100	59.310	MGP_WSBEiJ_G0033616	Sept7	76	49.709
MGP_WSBEiJ_G0032165	Sept1	100	38.095	MGP_WSBEiJ_G0017661	Sept8	76	36.795
MGP_WSBEiJ_G0032165	Sept1	100	40.136	MGP_WSBEiJ_G0034742	Sept6	76	41.349
MGP_WSBEiJ_G0032165	Sept1	100	50.685	MGP_WSBEiJ_G0021448	Sept3	86	46.575
MGP_WSBEiJ_G0032165	Sept1	100	50.000	MGP_WSBEiJ_G0018801	Sept9	83	46.000
MGP_WSBEiJ_G0032165	Sept1	100	64.828	MGP_WSBEiJ_G0015752	Sept2	100	60.748
MGP_WSBEiJ_G0032165	Sept1	100	66.897	MGP_WSBEiJ_G0018266	Sept4	94	66.514
MGP_WSBEiJ_G0032165	Sept1	100	47.260	MGP_WSBEiJ_G0021788	Sept12	77	43.775
MGP_WSBEiJ_G0032165	Sept1	100	68.276	MGP_WSBEiJ_G0021922	Sept5	93	63.068
MGP_WSBEiJ_G0032165	Sept1	100	40.816	MGP_WSBEiJ_G0028946	Sept11	76	40.762