EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0085659	RRM_1	PF00076.22	2.1e-63	1	3
MGP_WSBEiJ_P0085659	RRM_1	PF00076.22	2.1e-63	2	3
MGP_WSBEiJ_P0085659	RRM_1	PF00076.22	2.1e-63	3	3
MGP_WSBEiJ_P0085661	RRM_1	PF00076.22	2.1e-63	1	3
MGP_WSBEiJ_P0085661	RRM_1	PF00076.22	2.1e-63	2	3
MGP_WSBEiJ_P0085661	RRM_1	PF00076.22	2.1e-63	3	3
MGP_WSBEiJ_P0085656	RRM_1	PF00076.22	3.1e-60	1	3
MGP_WSBEiJ_P0085656	RRM_1	PF00076.22	3.1e-60	2	3
MGP_WSBEiJ_P0085656	RRM_1	PF00076.22	3.1e-60	3	3
MGP_WSBEiJ_P0085658	RRM_1	PF00076.22	7.5e-51	1	3
MGP_WSBEiJ_P0085658	RRM_1	PF00076.22	7.5e-51	2	3
MGP_WSBEiJ_P0085658	RRM_1	PF00076.22	7.5e-51	3	3
MGP_WSBEiJ_P0085664	RRM_1	PF00076.22	1.8e-26	1	2
MGP_WSBEiJ_P0085664	RRM_1	PF00076.22	1.8e-26	2	2
MGP_WSBEiJ_P0085663	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0085659	-	2033	-	MGP_WSBEiJ_P0085659	375 (aa)	-	-
MGP_WSBEiJ_T0085658	-	2835	-	MGP_WSBEiJ_P0085658	336 (aa)	-	-
MGP_WSBEiJ_T0085657	-	4263	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085656	-	4448	XM_006507570	MGP_WSBEiJ_P0085656	392 (aa)	XP_006507633	P70318
MGP_WSBEiJ_T0085666	-	560	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085667	-	804	-	MGP_WSBEiJ_P0085667	140 (aa)	-	-
MGP_WSBEiJ_T0085664	-	1344	-	MGP_WSBEiJ_P0085664	244 (aa)	-	-
MGP_WSBEiJ_T0085665	-	784	-	MGP_WSBEiJ_P0085665	41 (aa)	-	-
MGP_WSBEiJ_T0085662	-	2312	-	MGP_WSBEiJ_P0085662	135 (aa)	-	-
MGP_WSBEiJ_T0085663	-	562	-	MGP_WSBEiJ_P0085663	107 (aa)	-	-
MGP_WSBEiJ_T0085660	-	953	-	MGP_WSBEiJ_P0085660	106 (aa)	-	-
MGP_WSBEiJ_T0085661	-	1580	-	MGP_WSBEiJ_P0085661	375 (aa)	-	-
MGP_WSBEiJ_T0085668	-	1801	-	-	- (aa)	-	-
MGP_WSBEiJ_T0085669	-	674	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0032221	Tial1	67	40.244	MGP_WSBEiJ_G0016876	Cirbp	85	40.244
MGP_WSBEiJ_G0032221	Tial1	94	31.783	MGP_WSBEiJ_G0022441	Pabpc6	56	34.014
MGP_WSBEiJ_G0032221	Tial1	73	37.179	MGP_WSBEiJ_G0033593	Elavl3	90	37.179
MGP_WSBEiJ_G0032221	Tial1	100	87.440	MGP_WSBEiJ_G0030144	Tia1	97	86.992
MGP_WSBEiJ_G0032221	Tial1	69	31.469	MGP_WSBEiJ_G0029148	Msi1	56	41.379
MGP_WSBEiJ_G0032221	Tial1	72	34.615	MGP_WSBEiJ_G0027657	Elavl2	93	34.615
MGP_WSBEiJ_G0032221	Tial1	62	32.184	MGP_WSBEiJ_G0022029	Ncbp2	71	33.333
MGP_WSBEiJ_G0032221	Tial1	73	35.897	MGP_WSBEiJ_G0027789	Elavl4	88	35.897
MGP_WSBEiJ_G0032221	Tial1	81	31.111	MGP_WSBEiJ_G0018825	Rbfox3	53	31.868
MGP_WSBEiJ_G0032221	Tial1	94	31.008	MGP_WSBEiJ_G0021110	Pabpc1	88	35.000
MGP_WSBEiJ_G0032221	Tial1	77	31.646	MGP_WSBEiJ_G0027947	-	98	34.167
MGP_WSBEiJ_G0032221	Tial1	67	30.769	MGP_WSBEiJ_G0032466	Elavl1	95	30.769
MGP_WSBEiJ_G0032221	Tial1	92	32.500	MGP_WSBEiJ_G0023640	Pabpc2	50	35.036
MGP_WSBEiJ_G0032221	Tial1	73	32.000	MGP_WSBEiJ_G0026571	Rbm46	52	30.000
MGP_WSBEiJ_G0032221	Tial1	73	33.019	MGP_WSBEiJ_G0028077	Trnau1ap	60	32.386
MGP_WSBEiJ_G0032221	Tial1	99	31.618	MGP_WSBEiJ_G0026432	Pabpc4l	94	33.333
MGP_WSBEiJ_G0032221	Tial1	65	31.481	MGP_WSBEiJ_G0024598	Celf2	61	34.177
MGP_WSBEiJ_G0032221	Tial1	81	37.333	MGP_WSBEiJ_G0026790	Celf3	70	34.091
MGP_WSBEiJ_G0032221	Tial1	53	32.143	MGP_WSBEiJ_G0034019	Celf6	54	31.818
MGP_WSBEiJ_G0032221	Tial1	94	30.233	MGP_WSBEiJ_G0017782	-	80	30.114
MGP_WSBEiJ_G0032221	Tial1	64	31.461	MGP_WSBEiJ_G0034856	Rbmx	90	32.258