EuRBPDB

Description

Ensembl ID: MGP_WSBEiJ_G0032948 (Gene tree)
Gene ID: -
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 45847 bases
Position: chr8:80886120-80931966
Accession: 1935129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0088171	ResIII	PF04851.15	3.3e-10	1	1
MGP_WSBEiJ_P0088171	DEAD	PF00270.29	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0088175	-	699	-	-	- (aa)	-	-
MGP_WSBEiJ_T0088174	-	332	-	-	- (aa)	-	-
MGP_WSBEiJ_T0088176	-	722	-	-	- (aa)	-	-
MGP_WSBEiJ_T0088171	-	5963	-	MGP_WSBEiJ_P0088171	1114 (aa)	-	Q91ZW3
MGP_WSBEiJ_T0088173	-	503	-	-	- (aa)	-	-
MGP_WSBEiJ_T0088172	-	3021	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0032948	Smarca5	53	42.546	MGP_WSBEiJ_G0026878	Chd1l	64	42.289
MGP_WSBEiJ_G0032948	Smarca5	93	79.218	MGP_WSBEiJ_G0034792	Smarca1	90	82.670