EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0033593 (Gene tree)
Gene ID: -
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|PLE21|mHuC
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 3 (Hu antigen C)
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 37064 bases
Position: chr9:18992481-19029544
Accession: 109157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0090092	RRM_5	PF13893.6	4.1e-13	1	2
MGP_WSBEiJ_P0090092	RRM_5	PF13893.6	4.1e-13	2	2
MGP_WSBEiJ_P0090092	RRM_1	PF00076.22	5.3e-64	1	3
MGP_WSBEiJ_P0090092	RRM_1	PF00076.22	5.3e-64	2	3
MGP_WSBEiJ_P0090092	RRM_1	PF00076.22	5.3e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0090093	-	1014	-	MGP_WSBEiJ_P0090093	337 (aa)	-	-
MGP_WSBEiJ_T0090092	-	5031	XM_006510021	MGP_WSBEiJ_P0090092	367 (aa)	XP_006510084	Q60900

Gene Model

Click here to download MGP_WSBEiJ_G0033593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0033593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0033593	Elavl3	63	37.931	MGP_WSBEiJ_G0034510	Rbms3	70	38.562
MGP_WSBEiJ_G0033593	Elavl3	73	40.741	MGP_WSBEiJ_G0024598	Celf2	82	34.667
MGP_WSBEiJ_G0033593	Elavl3	62	37.500	MGP_WSBEiJ_G0016876	Cirbp	79	37.500
MGP_WSBEiJ_G0033593	Elavl3	99	80.323	MGP_WSBEiJ_G0027789	Elavl4	99	79.893
MGP_WSBEiJ_G0033593	Elavl3	90	36.145	MGP_WSBEiJ_G0026432	Pabpc4l	96	36.145
MGP_WSBEiJ_G0033593	Elavl3	95	36.145	MGP_WSBEiJ_G0021110	Pabpc1	89	36.145
MGP_WSBEiJ_G0033593	Elavl3	90	37.179	MGP_WSBEiJ_G0032221	Tial1	73	37.179
MGP_WSBEiJ_G0033593	Elavl3	100	78.400	MGP_WSBEiJ_G0027657	Elavl2	100	79.292
MGP_WSBEiJ_G0033593	Elavl3	92	36.145	MGP_WSBEiJ_G0022441	Pabpc6	61	36.145
MGP_WSBEiJ_G0033593	Elavl3	89	34.722	MGP_WSBEiJ_G0027947	-	92	31.061
MGP_WSBEiJ_G0033593	Elavl3	90	34.940	MGP_WSBEiJ_G0023640	Pabpc2	61	34.940
MGP_WSBEiJ_G0033593	Elavl3	69	33.708	MGP_WSBEiJ_G0034856	Rbmx	86	33.708
MGP_WSBEiJ_G0033593	Elavl3	77	38.272	MGP_WSBEiJ_G0016950	Celf5	65	38.462
MGP_WSBEiJ_G0033593	Elavl3	50	36.207	MGP_WSBEiJ_G0025028	Rbms1	51	33.645
MGP_WSBEiJ_G0033593	Elavl3	80	41.975	MGP_WSBEiJ_G0034019	Celf6	57	42.308
MGP_WSBEiJ_G0033593	Elavl3	59	30.488	MGP_WSBEiJ_G0026082	Pabpc1l	63	38.889
MGP_WSBEiJ_G0033593	Elavl3	71	42.391	MGP_WSBEiJ_G0025390	Celf1	57	43.590
MGP_WSBEiJ_G0033593	Elavl3	92	33.735	MGP_WSBEiJ_G0017782	-	83	30.719
MGP_WSBEiJ_G0033593	Elavl3	70	39.506	MGP_WSBEiJ_G0023480	Celf4	67	39.744
MGP_WSBEiJ_G0033593	Elavl3	89	34.940	MGP_WSBEiJ_G0026790	Celf3	98	35.632
MGP_WSBEiJ_G0033593	Elavl3	90	66.867	MGP_WSBEiJ_G0032466	Elavl1	95	66.265
MGP_WSBEiJ_G0033593	Elavl3	90	37.179	MGP_WSBEiJ_G0030144	Tia1	98	31.169