EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0033600 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 12960 bases
Position: chr9:19169653-19182612
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	1	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	2	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	3	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	4	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	5	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	6	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	7	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	8	9
MGP_WSBEiJ_P0090108	zf-C2H2	PF00096.26	3.4e-47	9	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	1	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	2	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	3	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	4	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	5	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	6	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	7	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	8	9
MGP_WSBEiJ_P0090109	zf-C2H2	PF00096.26	3.4e-46	9	9
MGP_WSBEiJ_P0090108	zf-met	PF12874.7	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0090109	-	1395	-	MGP_WSBEiJ_P0090109	464 (aa)	-	-
MGP_WSBEiJ_T0090108	-	2792	-	MGP_WSBEiJ_P0090108	457 (aa)	-	F7APL9

Gene Model

Click here to download MGP_WSBEiJ_G0033600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0033600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0033600	Zfp872	99	45.349	MGP_WSBEiJ_G0033271	Zfp1	98	45.349
MGP_WSBEiJ_G0033600	Zfp872	80	35.096	MGP_WSBEiJ_G0030741	Zfp784	77	34.762
MGP_WSBEiJ_G0033600	Zfp872	80	44.330	MGP_WSBEiJ_G0028696	Zbtb49	78	44.444
MGP_WSBEiJ_G0033600	Zfp872	84	47.619	MGP_WSBEiJ_G0032171	Zfp768	51	47.810
MGP_WSBEiJ_G0033600	Zfp872	87	42.632	MGP_WSBEiJ_G0032173	E430018J23Rik	87	44.340
MGP_WSBEiJ_G0033600	Zfp872	95	51.220	MGP_WSBEiJ_G0031267	Zfp715	75	51.220
MGP_WSBEiJ_G0033600	Zfp872	97	54.867	MGP_WSBEiJ_G0030348	Zfp637	88	54.867
MGP_WSBEiJ_G0033600	Zfp872	99	48.603	MGP_WSBEiJ_G0020042	Zfp748	99	48.603
MGP_WSBEiJ_G0033600	Zfp872	99	45.773	MGP_WSBEiJ_G0022526	Zfp677	98	45.773
MGP_WSBEiJ_G0033600	Zfp872	99	44.533	MGP_WSBEiJ_G0022528	Zfp51	94	44.533
MGP_WSBEiJ_G0033600	Zfp872	78	40.345	MGP_WSBEiJ_G0025864	Gzf1	51	40.345
MGP_WSBEiJ_G0033600	Zfp872	96	39.935	MGP_WSBEiJ_G0022552	Zscan10	99	39.935
MGP_WSBEiJ_G0033600	Zfp872	94	43.617	MGP_WSBEiJ_G0023871	Zfp236	69	43.478
MGP_WSBEiJ_G0033600	Zfp872	80	54.000	MGP_WSBEiJ_G0021323	Zfp251	72	54.000
MGP_WSBEiJ_G0033600	Zfp872	96	42.391	MGP_WSBEiJ_G0030972	Zfp94	96	42.391
MGP_WSBEiJ_G0033600	Zfp872	93	58.140	MGP_WSBEiJ_G0030971	Zfp61	67	58.140
MGP_WSBEiJ_G0033600	Zfp872	100	55.956	MGP_WSBEiJ_G0032894	Zfp709	99	55.956
MGP_WSBEiJ_G0033600	Zfp872	100	50.284	MGP_WSBEiJ_G0032895	Zfp882	97	47.059
MGP_WSBEiJ_G0033600	Zfp872	84	46.226	MGP_WSBEiJ_G0031001	Zfp574	94	37.059
MGP_WSBEiJ_G0033600	Zfp872	87	53.947	MGP_WSBEiJ_G0031137	Zfp420	99	53.947
MGP_WSBEiJ_G0033600	Zfp872	99	51.596	MGP_WSBEiJ_G0017627	Zfp354a	98	48.031
MGP_WSBEiJ_G0033600	Zfp872	99	49.630	MGP_WSBEiJ_G0017621	Zfp454	98	49.630
MGP_WSBEiJ_G0033600	Zfp872	87	43.251	MGP_WSBEiJ_G0031074	Zfp974	86	43.251
MGP_WSBEiJ_G0033600	Zfp872	99	43.979	MGP_WSBEiJ_G0022547	Zfp945	97	44.231
MGP_WSBEiJ_G0033600	Zfp872	86	51.562	MGP_WSBEiJ_G0030964	Zfp112	58	51.562
MGP_WSBEiJ_G0033600	Zfp872	94	48.857	MGP_WSBEiJ_G0030965	Zfp235	75	48.857
MGP_WSBEiJ_G0033600	Zfp872	83	44.928	MGP_WSBEiJ_G0030738	Zfp865	78	35.776
MGP_WSBEiJ_G0033600	Zfp872	87	38.579	MGP_WSBEiJ_G0018345	Zfp652	69	33.557
MGP_WSBEiJ_G0033600	Zfp872	93	37.758	MGP_WSBEiJ_G0017713	Zfp672	100	40.278
MGP_WSBEiJ_G0033600	Zfp872	99	42.460	MGP_WSBEiJ_G0026141	Zfp334	99	43.017
MGP_WSBEiJ_G0033600	Zfp872	87	47.500	MGP_WSBEiJ_G0030730	Zfp628	60	45.918
MGP_WSBEiJ_G0033600	Zfp872	78	45.556	MGP_WSBEiJ_G0029029	Gfi1	100	45.556
MGP_WSBEiJ_G0033600	Zfp872	100	53.548	MGP_WSBEiJ_G0017760	Zfp867	95	53.548
MGP_WSBEiJ_G0033600	Zfp872	100	47.059	MGP_WSBEiJ_G0020024	Zfp759	99	46.000
MGP_WSBEiJ_G0033600	Zfp872	100	50.909	MGP_WSBEiJ_G0020023	Rslcan18	80	51.724
MGP_WSBEiJ_G0033600	Zfp872	96	33.159	MGP_WSBEiJ_G0029875	Repin1	98	33.159
MGP_WSBEiJ_G0033600	Zfp872	79	45.192	MGP_WSBEiJ_G0026179	Zfp64	71	36.398
MGP_WSBEiJ_G0033600	Zfp872	99	48.339	MGP_WSBEiJ_G0025717	Zfp661	94	48.339
MGP_WSBEiJ_G0033600	Zfp872	84	41.964	MGP_WSBEiJ_G0028256	Zbtb17	56	42.378
MGP_WSBEiJ_G0033600	Zfp872	82	38.889	MGP_WSBEiJ_G0033112	Zfp319	90	38.889
MGP_WSBEiJ_G0033600	Zfp872	99	40.530	MGP_WSBEiJ_G0030006	Prdm5	84	40.530