EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034019 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 37470 bases
Position: chr9:58309414-58346883
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0091254	RRM_1	PF00076.22	2.1e-51	1	3
MGP_WSBEiJ_P0091254	RRM_1	PF00076.22	2.1e-51	2	3
MGP_WSBEiJ_P0091254	RRM_1	PF00076.22	2.1e-51	3	3
MGP_WSBEiJ_P0091252	RRM_1	PF00076.22	2.5e-51	1	3
MGP_WSBEiJ_P0091252	RRM_1	PF00076.22	2.5e-51	2	3
MGP_WSBEiJ_P0091252	RRM_1	PF00076.22	2.5e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0091256	-	591	-	-	- (aa)	-	-
MGP_WSBEiJ_T0091254	-	4851	-	MGP_WSBEiJ_P0091254	460 (aa)	-	-
MGP_WSBEiJ_T0091255	-	449	-	-	- (aa)	-	-
MGP_WSBEiJ_T0091252	-	2972	-	MGP_WSBEiJ_P0091252	481 (aa)	-	-
MGP_WSBEiJ_T0091253	-	2923	-	MGP_WSBEiJ_P0091253	162 (aa)	-	-
MGP_WSBEiJ_T0091251	-	3086	XM_006511540	MGP_WSBEiJ_P0091251	182 (aa)	XP_006511603	Q7TN33

Gene Model

Click here to download MGP_WSBEiJ_G0034019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034019	Celf6	54	31.818	MGP_WSBEiJ_G0032221	Tial1	53	32.143
MGP_WSBEiJ_G0034019	Celf6	75	85.526	MGP_WSBEiJ_G0026790	Celf3	81	87.368
MGP_WSBEiJ_G0034019	Celf6	57	44.444	MGP_WSBEiJ_G0032466	Elavl1	97	44.444
MGP_WSBEiJ_G0034019	Celf6	91	45.549	MGP_WSBEiJ_G0025390	Celf1	98	45.135
MGP_WSBEiJ_G0034019	Celf6	91	45.567	MGP_WSBEiJ_G0024598	Celf2	79	80.952
MGP_WSBEiJ_G0034019	Celf6	77	39.062	MGP_WSBEiJ_G0022441	Pabpc6	64	39.062
MGP_WSBEiJ_G0034019	Celf6	66	32.500	MGP_WSBEiJ_G0017632	Hnrnpab	65	31.414
MGP_WSBEiJ_G0034019	Celf6	95	35.802	MGP_WSBEiJ_G0027789	Elavl4	85	40.741
MGP_WSBEiJ_G0034019	Celf6	55	36.986	MGP_WSBEiJ_G0021110	Pabpc1	51	36.986
MGP_WSBEiJ_G0034019	Celf6	89	37.037	MGP_WSBEiJ_G0027657	Elavl2	78	40.741
MGP_WSBEiJ_G0034019	Celf6	57	42.308	MGP_WSBEiJ_G0033593	Elavl3	80	41.975
MGP_WSBEiJ_G0034019	Celf6	51	34.483	MGP_WSBEiJ_G0035146	Pabpc5	63	34.483
MGP_WSBEiJ_G0034019	Celf6	79	31.250	MGP_WSBEiJ_G0029908	Hnrnpa2b1	66	32.143
MGP_WSBEiJ_G0034019	Celf6	62	36.082	MGP_WSBEiJ_G0017782	-	84	36.082
MGP_WSBEiJ_G0034019	Celf6	52	42.105	MGP_WSBEiJ_G0034510	Rbms3	82	42.105
MGP_WSBEiJ_G0034019	Celf6	100	67.200	MGP_WSBEiJ_G0023480	Celf4	99	67.066
MGP_WSBEiJ_G0034019	Celf6	54	35.802	MGP_WSBEiJ_G0017231	Rbms2	50	35.802
MGP_WSBEiJ_G0034019	Celf6	75	84.783	MGP_WSBEiJ_G0016950	Celf5	100	66.443
MGP_WSBEiJ_G0034019	Celf6	62	32.955	MGP_WSBEiJ_G0030144	Tia1	85	36.000