EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034060 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 24242 bases
Position: chr9:63696812-63721053
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0091431	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_WSBEiJ_P0091432	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_WSBEiJ_P0091426	MMR_HSR1	PF01926.23	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0091427	-	726	-	MGP_WSBEiJ_P0091427	86 (aa)	-	-
MGP_WSBEiJ_T0091426	-	3952	-	MGP_WSBEiJ_P0091426	216 (aa)	-	P62492
MGP_WSBEiJ_T0091432	-	595	-	MGP_WSBEiJ_P0091432	155 (aa)	-	-
MGP_WSBEiJ_T0091433	-	695	-	-	- (aa)	-	-
MGP_WSBEiJ_T0091430	-	397	-	-	- (aa)	-	-
MGP_WSBEiJ_T0091431	-	462	-	MGP_WSBEiJ_P0091431	153 (aa)	-	-
MGP_WSBEiJ_T0091429	-	500	-	MGP_WSBEiJ_P0091429	86 (aa)	-	-
MGP_WSBEiJ_T0091428	-	603	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0034060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034060	Rab11a	93	42.254	MGP_WSBEiJ_G0023250	Rab31	86	41.071
MGP_WSBEiJ_G0034060	Rab11a	90	43.796	MGP_WSBEiJ_G0023259	Rab12	70	37.799
MGP_WSBEiJ_G0034060	Rab11a	81	34.127	MGP_WSBEiJ_G0030644	Kras	87	37.725
MGP_WSBEiJ_G0034060	Rab11a	76	31.667	MGP_WSBEiJ_G0018564	Arl4d	58	31.667
MGP_WSBEiJ_G0034060	Rab11a	87	43.609	MGP_WSBEiJ_G0026208	Rab22a	81	42.038
MGP_WSBEiJ_G0034060	Rab11a	75	40.000	MGP_WSBEiJ_G0021547	Rabl2	67	37.908
MGP_WSBEiJ_G0034060	Rab11a	90	49.635	MGP_WSBEiJ_G0029154	Rab35	99	42.512
MGP_WSBEiJ_G0034060	Rab11a	91	44.604	MGP_WSBEiJ_G0031658	Rab30	97	37.981
MGP_WSBEiJ_G0034060	Rab11a	68	30.065	MGP_WSBEiJ_G0015929	Arl8a	77	30.065
MGP_WSBEiJ_G0034060	Rab11a	88	31.293	MGP_WSBEiJ_G0029555	Rasl11a	60	31.293
MGP_WSBEiJ_G0034060	Rab11a	97	52.201	MGP_WSBEiJ_G0023961	Rab1b	84	55.357
MGP_WSBEiJ_G0034060	Rab11a	88	48.148	MGP_WSBEiJ_G0023158	Rab5a	91	41.951
MGP_WSBEiJ_G0034060	Rab11a	81	34.921	MGP_WSBEiJ_G0032352	Hras	85	37.654
MGP_WSBEiJ_G0034060	Rab11a	89	42.143	MGP_WSBEiJ_G0035208	Rab9b	86	41.040
MGP_WSBEiJ_G0034060	Rab11a	89	43.885	MGP_WSBEiJ_G0018727	Rab37	77	45.181
MGP_WSBEiJ_G0034060	Rab11a	79	39.669	MGP_WSBEiJ_G0030748	Rasl2-9	70	36.364
MGP_WSBEiJ_G0034060	Rab11a	74	30.303	MGP_WSBEiJ_G0018918	Dnajc27	60	30.303
MGP_WSBEiJ_G0034060	Rab11a	92	34.752	MGP_WSBEiJ_G0015316	Rab23	80	32.984
MGP_WSBEiJ_G0034060	Rab11a	100	50.000	MGP_WSBEiJ_G0017434	Rab1a	85	52.299
MGP_WSBEiJ_G0034060	Rab11a	95	54.110	MGP_WSBEiJ_G0024915	Rab14	99	45.540
MGP_WSBEiJ_G0034060	Rab11a	78	31.746	MGP_WSBEiJ_G0019050	Arl4a	60	31.746
MGP_WSBEiJ_G0034060	Rab11a	84	38.281	MGP_WSBEiJ_G0031718	Rab6a	84	35.955
MGP_WSBEiJ_G0034060	Rab11a	93	41.379	MGP_WSBEiJ_G0026440	Rab33b	85	37.799
MGP_WSBEiJ_G0034060	Rab11a	91	46.763	MGP_WSBEiJ_G0019212	Rab15	93	40.887
MGP_WSBEiJ_G0034060	Rab11a	88	35.821	MGP_WSBEiJ_G0034308	Rab6b	77	35.404
MGP_WSBEiJ_G0034060	Rab11a	95	70.748	MGP_WSBEiJ_G0026643	Rab25	99	62.150
MGP_WSBEiJ_G0034060	Rab11a	94	35.780	MGP_WSBEiJ_G0016745	Rab36	79	35.780
MGP_WSBEiJ_G0034060	Rab11a	90	40.426	MGP_WSBEiJ_G0034802	Rab33a	70	40.120
MGP_WSBEiJ_G0034060	Rab11a	88	49.630	MGP_WSBEiJ_G0018521	Rab5c	90	41.262
MGP_WSBEiJ_G0034060	Rab11a	86	34.586	MGP_WSBEiJ_G0028545	Rheb	89	32.927
MGP_WSBEiJ_G0034060	Rab11a	91	56.115	MGP_WSBEiJ_G0020607	Rab2b	95	51.366
MGP_WSBEiJ_G0034060	Rab11a	93	48.252	MGP_WSBEiJ_G0023404	Rab18	78	47.531
MGP_WSBEiJ_G0034060	Rab11a	81	31.746	MGP_WSBEiJ_G0034284	Mras	85	32.768
MGP_WSBEiJ_G0034060	Rab11a	100	96.078	MGP_WSBEiJ_G0022822	Rab11b	97	100.000
MGP_WSBEiJ_G0034060	Rab11a	88	49.265	MGP_WSBEiJ_G0034966	Rab39b	82	46.857
MGP_WSBEiJ_G0034060	Rab11a	81	34.921	MGP_WSBEiJ_G0026926	Nras	95	37.931
MGP_WSBEiJ_G0034060	Rab11a	87	38.686	MGP_WSBEiJ_G0030174	Rab7	91	45.833