EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034246 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 67064 bases
Position: chr9:92613771-92680834
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0092222	2OG-FeII_Oxy	PF03171.20	1.2e-05	1	1
MGP_WSBEiJ_P0092223	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0092226	-	1276	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092224	-	844	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092225	-	596	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092222	-	3647	-	MGP_WSBEiJ_P0092222	737 (aa)	-	Q9R0B9
MGP_WSBEiJ_T0092223	-	3661	-	MGP_WSBEiJ_P0092223	758 (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0034246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034246	Plod2	95	59.829	MGP_WSBEiJ_G0029390	Plod3	100	57.895
MGP_WSBEiJ_G0034246	Plod2	95	60.313	MGP_WSBEiJ_G0028305	Plod1	99	59.041