EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034256 (Gene tree)
Gene ID: -
Gene Symbol: Xrn1
Alias: Dhm2|exo|mXrn1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 108619 bases
Position: chr9:96109478-96218096
Accession: 891964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0092270	XRN_N	PF03159.18	2.9e-96	1	1
MGP_WSBEiJ_P0092266	XRN_N	PF03159.18	1.5e-95	1	1
MGP_WSBEiJ_P0092265	XRN_N	PF03159.18	1.5e-95	1	1
MGP_WSBEiJ_P0092267	XRN_N	PF03159.18	9.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0092266	-	10189	-	MGP_WSBEiJ_P0092266	1719 (aa)	-	-
MGP_WSBEiJ_T0092267	-	357	-	MGP_WSBEiJ_P0092267	40 (aa)	-	-
MGP_WSBEiJ_T0092265	-	5499	XM_006511153	MGP_WSBEiJ_P0092265	1723 (aa)	XP_006511216	A0A087WNV6
MGP_WSBEiJ_T0092268	-	3357	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092269	-	6235	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092271	-	3615	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092270	-	3093	-	MGP_WSBEiJ_P0092270	969 (aa)	-	-
MGP_WSBEiJ_T0092273	-	3046	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092272	-	844	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0034256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034256	Xrn1	90	66.667	MGP_WSBEiJ_G0025855	Xrn2	71	39.060