EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034341 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 71121 bases
Position: chr9:106914461-106985581
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0092688	eIF2A	PF08662.11	2.6e-10	1	1
MGP_WSBEiJ_P0092687	eIF2A	PF08662.11	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0092688	-	1242	-	MGP_WSBEiJ_P0092688	356 (aa)	-	-
MGP_WSBEiJ_T0092689	-	1443	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092691	-	526	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092690	-	727	-	-	- (aa)	-	-
MGP_WSBEiJ_T0092687	-	1695	XM_006511831	MGP_WSBEiJ_P0092687	405 (aa)	XP_006511894	Q8JZX3

Gene Model

Click here to download MGP_WSBEiJ_G0034341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034341	Poc1a	80	36.364	MGP_WSBEiJ_G0025707	Ciao1	85	36.364
MGP_WSBEiJ_G0034341	Poc1a	83	35.659	MGP_WSBEiJ_G0024781	Wdr5	98	30.973
MGP_WSBEiJ_G0034341	Poc1a	81	32.353	MGP_WSBEiJ_G0033946	Wdr61	97	31.658
MGP_WSBEiJ_G0034341	Poc1a	82	30.000	MGP_WSBEiJ_G0027566	Prpf4	56	30.000
MGP_WSBEiJ_G0034341	Poc1a	83	34.109	MGP_WSBEiJ_G0022080	Wdr5b	92	34.135
MGP_WSBEiJ_G0034341	Poc1a	82	32.218	MGP_WSBEiJ_G0020181	Utp15	52	32.218
MGP_WSBEiJ_G0034341	Poc1a	80	30.037	MGP_WSBEiJ_G0024130	Prpf19	55	30.037
MGP_WSBEiJ_G0034341	Poc1a	93	32.716	MGP_WSBEiJ_G0026902	Wdr3	61	31.447