EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034510 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Minus strand
Length: 1135608 bases
Position: chr9:117969378-119104985
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0093682	RRM_1	PF00076.22	1.5e-32	1	2
MGP_WSBEiJ_P0093682	RRM_1	PF00076.22	1.5e-32	2	2
MGP_WSBEiJ_P0093679	RRM_1	PF00076.22	1.2e-31	1	2
MGP_WSBEiJ_P0093679	RRM_1	PF00076.22	1.2e-31	2	2
MGP_WSBEiJ_P0093676	RRM_1	PF00076.22	1.4e-31	1	2
MGP_WSBEiJ_P0093676	RRM_1	PF00076.22	1.4e-31	2	2
MGP_WSBEiJ_P0093674	RRM_1	PF00076.22	1.5e-31	1	2
MGP_WSBEiJ_P0093674	RRM_1	PF00076.22	1.5e-31	2	2
MGP_WSBEiJ_P0093678	RRM_1	PF00076.22	1.5e-31	1	2
MGP_WSBEiJ_P0093678	RRM_1	PF00076.22	1.5e-31	2	2
MGP_WSBEiJ_P0093673	RRM_1	PF00076.22	1.7e-31	1	2
MGP_WSBEiJ_P0093673	RRM_1	PF00076.22	1.7e-31	2	2
MGP_WSBEiJ_P0093677	RRM_1	PF00076.22	2e-31	1	2
MGP_WSBEiJ_P0093677	RRM_1	PF00076.22	2e-31	2	2
MGP_WSBEiJ_P0093680	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0093678	-	2230	-	MGP_WSBEiJ_P0093678	415 (aa)	-	-
MGP_WSBEiJ_T0093679	-	1979	-	MGP_WSBEiJ_P0093679	386 (aa)	-	-
MGP_WSBEiJ_T0093683	-	1433	-	-	- (aa)	-	-
MGP_WSBEiJ_T0093682	-	619	-	MGP_WSBEiJ_P0093682	206 (aa)	-	-
MGP_WSBEiJ_T0093681	-	2016	-	-	- (aa)	-	-
MGP_WSBEiJ_T0093680	-	585	-	MGP_WSBEiJ_P0093680	194 (aa)	-	-
MGP_WSBEiJ_T0093673	-	7899	XM_017313248	MGP_WSBEiJ_P0093673	431 (aa)	XP_017168737	Q8BWL5
MGP_WSBEiJ_T0093676	-	2160	-	MGP_WSBEiJ_P0093676	402 (aa)	-	-
MGP_WSBEiJ_T0093677	-	2128	-	MGP_WSBEiJ_P0093677	463 (aa)	-	-
MGP_WSBEiJ_T0093674	-	3310	-	MGP_WSBEiJ_P0093674	414 (aa)	-	-
MGP_WSBEiJ_T0093675	-	1626	-	MGP_WSBEiJ_P0093675	185 (aa)	-	-
MGP_WSBEiJ_T0093684	-	1752	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0034510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034510	Rbms3	77	33.708	MGP_WSBEiJ_G0022441	Pabpc6	59	34.091
MGP_WSBEiJ_G0034510	Rbms3	76	39.474	MGP_WSBEiJ_G0026790	Celf3	91	39.474
MGP_WSBEiJ_G0034510	Rbms3	93	36.134	MGP_WSBEiJ_G0016950	Celf5	57	42.105
MGP_WSBEiJ_G0034510	Rbms3	99	80.841	MGP_WSBEiJ_G0025028	Rbms1	96	71.538
MGP_WSBEiJ_G0034510	Rbms3	72	40.789	MGP_WSBEiJ_G0023480	Celf4	68	40.789
MGP_WSBEiJ_G0034510	Rbms3	83	37.097	MGP_WSBEiJ_G0027789	Elavl4	70	36.458
MGP_WSBEiJ_G0034510	Rbms3	97	34.356	MGP_WSBEiJ_G0032466	Elavl1	91	34.356
MGP_WSBEiJ_G0034510	Rbms3	77	30.818	MGP_WSBEiJ_G0026082	Pabpc1l	59	30.818
MGP_WSBEiJ_G0034510	Rbms3	83	37.222	MGP_WSBEiJ_G0027657	Elavl2	69	37.209
MGP_WSBEiJ_G0034510	Rbms3	70	38.562	MGP_WSBEiJ_G0033593	Elavl3	63	37.931
MGP_WSBEiJ_G0034510	Rbms3	75	37.079	MGP_WSBEiJ_G0024598	Celf2	77	39.474
MGP_WSBEiJ_G0034510	Rbms3	68	43.421	MGP_WSBEiJ_G0025390	Celf1	53	43.421
MGP_WSBEiJ_G0034510	Rbms3	83	80.663	MGP_WSBEiJ_G0017231	Rbms2	86	66.758
MGP_WSBEiJ_G0034510	Rbms3	82	42.105	MGP_WSBEiJ_G0034019	Celf6	52	42.105