EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034793 (Gene tree)
Gene ID: -
Gene Symbol: Ocrl
Alias: 9530014D17Rik|BB143339|OCRL1
Full Name: oculocerebrorenal syndrome of Lowe
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 54970 bases
Position: chrX:42580815-42635784
Accession: 109589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0094564	Exo_endo_phos	PF03372.23	3.2e-15	1	1
MGP_WSBEiJ_P0094567	Exo_endo_phos	PF03372.23	4e-15	1	1
MGP_WSBEiJ_P0094563	Exo_endo_phos	PF03372.23	4.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0094567	-	5511	-	MGP_WSBEiJ_P0094567	887 (aa)	-	-
MGP_WSBEiJ_T0094566	-	2839	-	-	- (aa)	-	-
MGP_WSBEiJ_T0094565	-	2930	-	-	- (aa)	-	-
MGP_WSBEiJ_T0094564	-	3208	-	MGP_WSBEiJ_P0094564	727 (aa)	-	-
MGP_WSBEiJ_T0094563	-	5250	XM_011251008	MGP_WSBEiJ_P0094563	900 (aa)	XP_011249310	Q6NVF0
MGP_WSBEiJ_T0094569	-	799	-	MGP_WSBEiJ_P0094569	265 (aa)	-	-
MGP_WSBEiJ_T0094568	-	723	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_WSBEiJ_G0034793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034793's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034793	Ocrl	50	32.039	MGP_WSBEiJ_G0022409	Synj2	58	32.653
MGP_WSBEiJ_G0034793	Ocrl	82	51.578	MGP_WSBEiJ_G0027962	Inpp5b	71	51.748