EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_WSBEiJ_G0034859 (Gene tree)
Gene ID: -
Gene Symbol: Zic3
Alias: Bn|Ka
Full Name: zinc finger protein of the cerebellum 3
Gene Type: protein_coding
Species: Mus_musculus_wsbeij
Status: putative
Strand: Plus strand
Length: 19010 bases
Position: chrX:52910151-52929160
Accession: 106676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_WSBEiJ_P0094749	zf-C2H2	PF00096.26	8.4e-23	1	4
MGP_WSBEiJ_P0094749	zf-C2H2	PF00096.26	8.4e-23	2	4
MGP_WSBEiJ_P0094749	zf-C2H2	PF00096.26	8.4e-23	3	4
MGP_WSBEiJ_P0094749	zf-C2H2	PF00096.26	8.4e-23	4	4
MGP_WSBEiJ_P0094748	zf-C2H2	PF00096.26	3.3e-21	1	4
MGP_WSBEiJ_P0094748	zf-C2H2	PF00096.26	3.3e-21	2	4
MGP_WSBEiJ_P0094748	zf-C2H2	PF00096.26	3.3e-21	3	4
MGP_WSBEiJ_P0094748	zf-C2H2	PF00096.26	3.3e-21	4	4
MGP_WSBEiJ_P0094750	zf-C2H2	PF00096.26	2.1e-20	1	4
MGP_WSBEiJ_P0094750	zf-C2H2	PF00096.26	2.1e-20	2	4
MGP_WSBEiJ_P0094750	zf-C2H2	PF00096.26	2.1e-20	3	4
MGP_WSBEiJ_P0094750	zf-C2H2	PF00096.26	2.1e-20	4	4
MGP_WSBEiJ_P0094749	zf-met	PF12874.7	7.8e-05	1	1
MGP_WSBEiJ_P0094750	zf-met	PF12874.7	0.00076	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_WSBEiJ_T0094750	-	1950	-	MGP_WSBEiJ_P0094750	456 (aa)	-	-
MGP_WSBEiJ_T0094749	-	2982	-	MGP_WSBEiJ_P0094749	246 (aa)	-	-
MGP_WSBEiJ_T0094748	-	3951	-	MGP_WSBEiJ_P0094748	466 (aa)	-	-
MGP_WSBEiJ_T0094747	-	566	XM_006527973	MGP_WSBEiJ_P0094747	89 (aa)	XP_006528036	Q62521

Gene Model

Click here to download MGP_WSBEiJ_G0034859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_WSBEiJ_G0034859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_WSBEiJ_G0034859	Zic3	64	33.540	MGP_WSBEiJ_G0026179	Zfp64	56	33.540
MGP_WSBEiJ_G0034859	Zic3	64	38.849	MGP_WSBEiJ_G0021856	Snai2	50	38.776