EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00000197 (Gene tree)
Gene ID: -
Gene Symbol: aars-2
Alias: ars-2
Full Name: Alanine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3745 bases
Position: chrI:3983171-3986915
Accession: O01541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F28H1	tRNA_SAD	PF07973.14	6.8e-16	1	1
F28H1	tRNA_SAD	PF07973.14	6.8e-16	1	1
F28H1	tRNA_SAD	PF07973.14	6.8e-16	1	1
F28H1	tRNA_SAD	PF07973.14	6.8e-16	1	1
F28H1	tRNA-synt_2c	PF01411.19	9.5e-228	1	1
F28H1	tRNA-synt_2c	PF01411.19	9.5e-228	1	1
F28H1	tRNA-synt_2c	PF01411.19	9.5e-228	1	1
F28H1	tRNA-synt_2c	PF01411.19	9.5e-228	1	1
F28H1	DHHA1	PF02272.19	3.5e-20	1	1
F28H1	DHHA1	PF02272.19	3.5e-20	1	1
F28H1	DHHA1	PF02272.19	3.5e-20	1	1
F28H1	DHHA1	PF02272.19	3.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F28H1.3.4	-	3459	NM_058880	F28H1.3.4	968 (aa)	NP_491281	O01541
F28H1.3.3	-	3125	NM_058880	F28H1.3.3	968 (aa)	NP_491281	O01541
F28H1.3.2	-	3126	NM_058880	F28H1.3.2	968 (aa)	NP_491281	O01541
F28H1.3.1	-	3138	NM_058880	F28H1.3.1	968 (aa)	NP_491281	O01541

Gene Model

Click here to download WBGene00000197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00000197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00000197	aars-2	81	40.101	WBGene00000196	aars-1	94	40.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00000197	aars-2	99	57.704	ENSG00000090861	AARS	99	57.704	Homo_sapiens
WBGene00000197	aars-2	99	57.025	ENSAPOG00000022413	aars	99	57.025	Acanthochromis_polyacanthus
WBGene00000197	aars-2	99	57.704	ENSAMEG00000004815	AARS	99	57.704	Ailuropoda_melanoleuca
WBGene00000197	aars-2	99	56.405	ENSACIG00000016586	aars	99	56.405	Amphilophus_citrinellus
WBGene00000197	aars-2	99	56.921	ENSAOCG00000007036	aars	99	56.921	Amphiprion_ocellaris
WBGene00000197	aars-2	99	56.670	ENSAPEG00000022892	aars	99	56.670	Amphiprion_percula
WBGene00000197	aars-2	99	57.438	ENSATEG00000013826	aars	99	57.438	Anabas_testudineus
WBGene00000197	aars-2	78	65.699	ENSAPLG00000008519	AARS	83	64.261	Anas_platyrhynchos
WBGene00000197	aars-2	99	57.645	ENSACAG00000002808	AARS	99	57.645	Anolis_carolinensis
WBGene00000197	aars-2	99	52.947	ENSANAG00000029082	AARS	94	70.563	Aotus_nancymaae
WBGene00000197	aars-2	99	56.508	ENSACLG00000022314	aars	99	56.508	Astatotilapia_calliptera
WBGene00000197	aars-2	99	57.601	ENSAMXG00000003368	aars	99	57.601	Astyanax_mexicanus
WBGene00000197	aars-2	99	57.497	ENSBTAG00000019810	AARS	99	57.497	Bos_taurus
WBGene00000197	aars-2	99	57.601	ENSCJAG00000014562	AARS	96	71.837	Callithrix_jacchus
WBGene00000197	aars-2	99	57.704	ENSCAFG00000020132	AARS	99	57.704	Canis_familiaris
WBGene00000197	aars-2	99	57.704	ENSCAFG00020020967	AARS	99	57.704	Canis_lupus_dingo
WBGene00000197	aars-2	99	57.394	ENSCHIG00000015632	AARS	99	57.394	Capra_hircus
WBGene00000197	aars-2	99	57.645	ENSTSYG00000010987	AARS	96	72.541	Carlito_syrichta
WBGene00000197	aars-2	90	67.143	ENSCAPG00000013564	AARS	99	67.143	Cavia_aperea
WBGene00000197	aars-2	99	57.911	ENSCPOG00000002373	AARS	99	57.911	Cavia_porcellus
WBGene00000197	aars-2	99	57.601	ENSCCAG00000001818	AARS	93	72.398	Cebus_capucinus
WBGene00000197	aars-2	99	57.601	ENSCATG00000032821	AARS	96	72.131	Cercocebus_atys
WBGene00000197	aars-2	99	57.394	ENSCLAG00000004366	AARS	99	57.394	Chinchilla_lanigera
WBGene00000197	aars-2	99	57.601	ENSCSAG00000004476	AARS	99	57.601	Chlorocebus_sabaeus
WBGene00000197	aars-2	54	66.514	ENSCHOG00000000347	-	61	66.514	Choloepus_hoffmanni
WBGene00000197	aars-2	99	58.428	ENSCPBG00000002995	AARS	99	58.428	Chrysemys_picta_bellii
WBGene00000197	aars-2	99	53.271	ENSCING00000024107	-	99	53.271	Ciona_intestinalis
WBGene00000197	aars-2	99	52.440	ENSCSAVG00000000721	-	98	52.440	Ciona_savignyi
WBGene00000197	aars-2	99	55.418	ENSCANG00000040257	AARS	96	71.721	Colobus_angolensis_palliatus
WBGene00000197	aars-2	99	57.748	ENSCGRG00001014390	AARS	99	57.748	Cricetulus_griseus_chok1gshd
WBGene00000197	aars-2	99	57.748	ENSCGRG00000017420	AARS	99	57.748	Cricetulus_griseus_crigri
WBGene00000197	aars-2	99	56.612	ENSCSEG00000014258	aars	99	56.612	Cynoglossus_semilaevis
WBGene00000197	aars-2	83	54.467	ENSCVAG00000000882	aars	99	54.500	Cyprinodon_variegatus
WBGene00000197	aars-2	99	57.541	ENSDARG00000069142	aars	96	68.660	Danio_rerio
WBGene00000197	aars-2	99	55.487	ENSDNOG00000004586	AARS	99	55.487	Dasypus_novemcinctus
WBGene00000197	aars-2	99	57.911	ENSDORG00000004110	Aars	99	57.911	Dipodomys_ordii
WBGene00000197	aars-2	100	55.465	FBgn0027094	AlaRS	100	55.465	Drosophila_melanogaster
WBGene00000197	aars-2	99	53.216	ENSETEG00000002451	AARS	99	53.216	Echinops_telfairi
WBGene00000197	aars-2	99	55.233	ENSEBUG00000004521	aars	99	54.674	Eptatretus_burgeri
WBGene00000197	aars-2	99	57.601	ENSEASG00005013408	AARS	89	57.601	Equus_asinus_asinus
WBGene00000197	aars-2	99	57.601	ENSECAG00000008561	AARS	94	57.601	Equus_caballus
WBGene00000197	aars-2	93	70.064	ENSEEUG00000006335	AARS	92	70.064	Erinaceus_europaeus
WBGene00000197	aars-2	99	56.256	ENSELUG00000015496	aars	99	56.256	Esox_lucius
WBGene00000197	aars-2	99	57.704	ENSFCAG00000009482	AARS	99	57.704	Felis_catus
WBGene00000197	aars-2	99	58.118	ENSFALG00000007196	AARS	99	58.118	Ficedula_albicollis
WBGene00000197	aars-2	99	57.748	ENSFDAG00000011896	AARS	99	57.748	Fukomys_damarensis
WBGene00000197	aars-2	56	59.489	ENSFHEG00000004067	aars	90	59.489	Fundulus_heteroclitus
WBGene00000197	aars-2	99	53.106	ENSGMOG00000008147	aars	99	53.106	Gadus_morhua
WBGene00000197	aars-2	99	57.601	ENSGALG00000001965	AARS	99	57.601	Gallus_gallus
WBGene00000197	aars-2	99	56.508	ENSGAFG00000015182	aars	99	56.508	Gambusia_affinis
WBGene00000197	aars-2	99	54.051	ENSGACG00000002667	aars	99	53.664	Gasterosteus_aculeatus
WBGene00000197	aars-2	99	57.867	ENSGAGG00000014004	AARS	99	57.867	Gopherus_agassizii
WBGene00000197	aars-2	89	71.285	ENSGGOG00000008737	AARS	98	71.285	Gorilla_gorilla
WBGene00000197	aars-2	99	51.240	ENSHBUG00000011211	aars	99	51.240	Haplochromis_burtoni
WBGene00000197	aars-2	99	57.497	ENSHGLG00000011756	AARS	99	57.497	Heterocephalus_glaber_female
WBGene00000197	aars-2	99	57.497	ENSHGLG00100011337	AARS	99	57.497	Heterocephalus_glaber_male
WBGene00000197	aars-2	99	56.095	ENSHCOG00000012089	aars	99	56.095	Hippocampus_comes
WBGene00000197	aars-2	99	57.438	ENSIPUG00000020538	aars	99	57.438	Ictalurus_punctatus
WBGene00000197	aars-2	99	57.601	ENSSTOG00000006856	AARS	99	57.601	Ictidomys_tridecemlineatus
WBGene00000197	aars-2	99	57.497	ENSJJAG00000008731	Aars	99	57.497	Jaculus_jaculus
WBGene00000197	aars-2	99	56.567	ENSKMAG00000009832	aars	99	56.567	Kryptolebias_marmoratus
WBGene00000197	aars-2	99	55.739	ENSLBEG00000018551	aars	99	55.739	Labrus_bergylta
WBGene00000197	aars-2	99	55.016	ENSLACG00000004892	AARS	99	55.016	Latimeria_chalumnae
WBGene00000197	aars-2	99	56.206	ENSLAFG00000006645	AARS	99	56.206	Loxodonta_africana
WBGene00000197	aars-2	99	57.394	ENSMFAG00000002309	AARS	97	63.433	Macaca_fascicularis
WBGene00000197	aars-2	99	57.394	ENSMMUG00000021653	AARS	96	71.311	Macaca_mulatta
WBGene00000197	aars-2	99	54.876	ENSMNEG00000014902	AARS	97	63.433	Macaca_nemestrina
WBGene00000197	aars-2	95	53.688	ENSMLEG00000035037	AARS	99	53.688	Mandrillus_leucophaeus
WBGene00000197	aars-2	99	56.818	ENSMAMG00000016945	aars	99	56.818	Mastacembelus_armatus
WBGene00000197	aars-2	99	56.405	ENSMZEG00005010733	aars	99	56.405	Maylandia_zebra
WBGene00000197	aars-2	99	57.394	ENSMGAG00000002038	AARS	98	57.394	Meleagris_gallopavo
WBGene00000197	aars-2	99	57.601	ENSMAUG00000021342	Aars	99	57.601	Mesocricetus_auratus
WBGene00000197	aars-2	99	57.497	ENSMICG00000000255	AARS	96	72.131	Microcebus_murinus
WBGene00000197	aars-2	99	57.704	ENSMOCG00000005336	Aars	99	57.704	Microtus_ochrogaster
WBGene00000197	aars-2	99	55.212	ENSMMOG00000002584	aars	99	55.418	Mola_mola
WBGene00000197	aars-2	99	55.906	ENSMODG00000014518	AARS	99	55.906	Monodelphis_domestica
WBGene00000197	aars-2	99	56.302	ENSMALG00000007912	aars	99	56.302	Monopterus_albus
WBGene00000197	aars-2	99	58.058	ENSMUSG00000031960	Aars	99	58.058	Mus_musculus
WBGene00000197	aars-2	99	57.808	ENSMPUG00000010060	AARS	99	57.808	Mustela_putorius_furo
WBGene00000197	aars-2	99	57.394	ENSMLUG00000007431	AARS	99	57.394	Myotis_lucifugus
WBGene00000197	aars-2	99	57.394	ENSNGAG00000003676	Aars	99	57.394	Nannospalax_galili
WBGene00000197	aars-2	99	56.612	ENSNBRG00000007321	aars	99	56.612	Neolamprologus_brichardi
WBGene00000197	aars-2	94	49.288	ENSMEUG00000016034	-	99	49.288	Notamacropus_eugenii
WBGene00000197	aars-2	58	59.788	ENSMEUG00000006934	-	99	59.788	Notamacropus_eugenii
WBGene00000197	aars-2	99	56.612	ENSOPRG00000003373	AARS	99	56.612	Ochotona_princeps
WBGene00000197	aars-2	84	68.182	ENSODEG00000014606	-	66	68.182	Octodon_degus
WBGene00000197	aars-2	92	64.476	ENSODEG00000014435	-	97	64.476	Octodon_degus
WBGene00000197	aars-2	99	56.715	ENSONIG00000011185	aars	99	56.715	Oreochromis_niloticus
WBGene00000197	aars-2	99	57.084	ENSOANG00000001157	AARS	99	57.084	Ornithorhynchus_anatinus
WBGene00000197	aars-2	99	55.915	ENSOCUG00000008872	AARS	99	55.915	Oryctolagus_cuniculus
WBGene00000197	aars-2	99	55.682	ENSORLG00000013398	aars	99	55.682	Oryzias_latipes
WBGene00000197	aars-2	99	55.785	ENSORLG00020017581	aars	99	55.785	Oryzias_latipes_hni
WBGene00000197	aars-2	99	55.785	ENSORLG00015007783	aars	99	55.785	Oryzias_latipes_hsok
WBGene00000197	aars-2	99	56.715	ENSOMEG00000014361	aars	99	56.715	Oryzias_melastigma
WBGene00000197	aars-2	99	57.808	ENSOGAG00000011601	AARS	99	57.808	Otolemur_garnettii
WBGene00000197	aars-2	99	57.497	ENSOARG00000005286	AARS	99	57.497	Ovis_aries
WBGene00000197	aars-2	99	57.601	ENSPPAG00000040404	AARS	96	72.541	Pan_paniscus
WBGene00000197	aars-2	99	57.601	ENSPPRG00000013214	AARS	99	57.601	Panthera_pardus
WBGene00000197	aars-2	99	57.601	ENSPTIG00000021477	AARS	99	57.601	Panthera_tigris_altaica
WBGene00000197	aars-2	99	57.601	ENSPTRG00000008297	AARS	96	72.541	Pan_troglodytes
WBGene00000197	aars-2	99	57.601	ENSPANG00000020452	AARS	97	64.179	Papio_anubis
WBGene00000197	aars-2	99	56.567	ENSPKIG00000002593	aars	99	56.567	Paramormyrops_kingsleyae
WBGene00000197	aars-2	99	56.656	ENSPSIG00000012820	AARS	99	56.656	Pelodiscus_sinensis
WBGene00000197	aars-2	99	56.360	ENSPMGG00000016971	aars	99	56.360	Periophthalmus_magnuspinnatus
WBGene00000197	aars-2	99	57.704	ENSPEMG00000010864	Aars	99	57.704	Peromyscus_maniculatus_bairdii
WBGene00000197	aars-2	99	53.388	ENSPMAG00000001946	aars	99	53.388	Petromyzon_marinus
WBGene00000197	aars-2	99	56.729	ENSPCIG00000010681	AARS	99	56.729	Phascolarctos_cinereus
WBGene00000197	aars-2	99	56.198	ENSPFOG00000015763	aars	99	56.198	Poecilia_formosa
WBGene00000197	aars-2	99	56.198	ENSPLAG00000014226	aars	99	56.198	Poecilia_latipinna
WBGene00000197	aars-2	99	56.302	ENSPMEG00000019736	aars	99	56.302	Poecilia_mexicana
WBGene00000197	aars-2	99	55.992	ENSPREG00000019562	aars	99	55.992	Poecilia_reticulata
WBGene00000197	aars-2	75	68.347	ENSPPYG00000007544	-	75	68.347	Pongo_abelii
WBGene00000197	aars-2	76	75.556	ENSPCAG00000012883	AARS	75	75.556	Procavia_capensis
WBGene00000197	aars-2	99	57.335	ENSPCOG00000016630	AARS	96	71.837	Propithecus_coquereli
WBGene00000197	aars-2	99	57.394	ENSPVAG00000000669	AARS	99	57.394	Pteropus_vampyrus
WBGene00000197	aars-2	99	56.405	ENSPNYG00000010796	aars	99	56.405	Pundamilia_nyererei
WBGene00000197	aars-2	99	57.291	ENSPNAG00000015269	aars	91	57.291	Pygocentrus_nattereri
WBGene00000197	aars-2	99	57.394	ENSRNOG00000018404	Aars	99	57.394	Rattus_norvegicus
WBGene00000197	aars-2	99	57.497	ENSRBIG00000032650	AARS	97	63.158	Rhinopithecus_bieti
WBGene00000197	aars-2	99	57.601	ENSRROG00000027324	AARS	97	67.286	Rhinopithecus_roxellana
WBGene00000197	aars-2	96	49.840	YOR335C	ALA1	98	49.430	Saccharomyces_cerevisiae
WBGene00000197	aars-2	99	57.394	ENSSBOG00000022141	AARS	96	71.837	Saimiri_boliviensis_boliviensis
WBGene00000197	aars-2	99	57.187	ENSSHAG00000007347	AARS	99	57.187	Sarcophilus_harrisii
WBGene00000197	aars-2	99	55.201	ENSSFOG00015013147	aars	99	55.201	Scleropages_formosus
WBGene00000197	aars-2	99	57.541	ENSSFOG00015011897	AARS	99	57.541	Scleropages_formosus
WBGene00000197	aars-2	99	56.095	ENSSMAG00000014488	aars	99	56.095	Scophthalmus_maximus
WBGene00000197	aars-2	99	55.682	ENSSDUG00000021127	aars	99	55.682	Seriola_dumerili
WBGene00000197	aars-2	99	55.785	ENSSLDG00000017716	aars	99	55.785	Seriola_lalandi_dorsalis
WBGene00000197	aars-2	51	70.330	ENSSARG00000006382	-	69	70.330	Sorex_araneus
WBGene00000197	aars-2	99	55.636	ENSSPUG00000001911	AARS	99	55.636	Sphenodon_punctatus
WBGene00000197	aars-2	99	56.508	ENSSPAG00000001290	aars	99	56.508	Stegastes_partitus
WBGene00000197	aars-2	96	34.523	ENSSSCG00000040225	-	99	34.523	Sus_scrofa
WBGene00000197	aars-2	99	57.291	ENSSSCG00000002723	-	99	57.291	Sus_scrofa
WBGene00000197	aars-2	99	58.118	ENSTGUG00000005683	AARS	99	58.118	Taeniopygia_guttata
WBGene00000197	aars-2	90	57.273	ENSTRUG00000000907	aars	97	62.143	Takifugu_rubripes
WBGene00000197	aars-2	99	56.863	ENSTNIG00000004016	aars	99	56.863	Tetraodon_nigroviridis
WBGene00000197	aars-2	95	41.585	ENSTBEG00000017122	-	99	41.585	Tupaia_belangeri
WBGene00000197	aars-2	99	57.704	ENSUAMG00000007008	AARS	99	57.704	Ursus_americanus
WBGene00000197	aars-2	99	57.808	ENSUMAG00000016975	AARS	99	57.808	Ursus_maritimus
WBGene00000197	aars-2	75	65.979	ENSVPAG00000003189	AARS	79	65.979	Vicugna_pacos
WBGene00000197	aars-2	99	57.808	ENSVVUG00000018036	AARS	99	57.808	Vulpes_vulpes
WBGene00000197	aars-2	99	56.774	ENSXETG00000007668	aars	99	56.774	Xenopus_tropicalis
WBGene00000197	aars-2	99	56.095	ENSXCOG00000013625	aars	99	56.095	Xiphophorus_couchianus
WBGene00000197	aars-2	99	56.198	ENSXMAG00000006282	aars	99	56.198	Xiphophorus_maculatus