EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00000380 (Gene tree)
Gene ID: -
Gene Symbol: cct-5
Alias: -
Full Name: T-complex protein 1 subunit epsilon
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 8924
Position: chrIII: 4499191-4508114
Accession: P47209
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C07G2.3a.2	-	1928	NM_171104	C07G2.3a.2	542 (aa)	NP_741117	P47209
C07G2.3a.1	-	1829	NM_171104	C07G2.3a.1	542 (aa)	NP_741117	P47209
C07G2.3b.1	-	1544	-	C07G2.3b.1	336 (aa)	NP_497915	Q8WQG4
C07G2.3b.2	-	1476	-	C07G2.3b.2	336 (aa)	NP_497915	Q8WQG4
C07G2.3b.3	-	1465	-	C07G2.3b.3	336 (aa)	NP_497915	Q8WQG4
C07G2.3b.4	-	1564	-	C07G2.3b.4	336 (aa)	NP_497915	Q8WQG4
C07G2.3b.5	-	1464	-	C07G2.3b.5	336 (aa)	NP_497915	Q8WQG4

Gene Model

Click here to download WBGene00000380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00000380's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00000380	cct-5	99	68.563	FBgn0010621	CCT5	99	69.368	Drosophila_melanogaster
WBGene00000380	cct-5	98	70.821	ENSG00000150753	CCT5	99	70.482	Homo_sapiens
WBGene00000380	cct-5	98	69.301	ENSMUSG00000022234	Cct5	100	70.352	Mus_musculus
WBGene00000380	cct-5	98	59.555	YJR064W	CCT5	96	59.555	Saccharomyces_cerevisiae