EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00000796 (Gene tree)
Gene ID: -
Gene Symbol: crn-3
Alias: -
Full Name: Cell death-related nuclease 3%3B Cell-death-Related Nuclease
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4611 bases
Position: chrII:10588042-10592652
Accession: G5EBX6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C14A4	HRDC	PF00570.23	7.9e-12	1	1
C14A4	HRDC	PF00570.23	8e-12	1	1
C14A4	PMC2NT	PF08066.12	8e-10	1	1
C14A4	PMC2NT	PF08066.12	2.1e-09	1	1
C14A4	DNA_pol_A_exo1	PF01612.20	2.5e-40	1	1
C14A4	DNA_pol_A_exo1	PF01612.20	2.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C14A4.4b	-	2726	NM_001322753	C14A4.4b	870 (aa)	NP_001309468	Q8I129
C14A4.4a	-	2726	NM_001322753	C14A4.4a	876 (aa)	NP_001309468	G5EBX6

Gene Model

Click here to download WBGene00000796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00000796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00000796	crn-3	77	33.666	ENSG00000171824	EXOSC10	75	34.226	Homo_sapiens
WBGene00000796	crn-3	63	37.828	ENSAPOG00000013304	exosc10	67	38.681	Acanthochromis_polyacanthus
WBGene00000796	crn-3	61	35.548	ENSAMEG00000009546	EXOSC10	61	35.907	Ailuropoda_melanoleuca
WBGene00000796	crn-3	62	36.749	ENSACIG00000020455	exosc10	67	36.749	Amphilophus_citrinellus
WBGene00000796	crn-3	62	38.146	ENSAOCG00000018823	exosc10	67	38.146	Amphiprion_ocellaris
WBGene00000796	crn-3	63	37.478	ENSAPEG00000017786	exosc10	67	38.146	Amphiprion_percula
WBGene00000796	crn-3	63	38.004	ENSATEG00000017271	exosc10	63	38.004	Anabas_testudineus
WBGene00000796	crn-3	61	38.230	ENSAPLG00000006652	EXOSC10	63	38.230	Anas_platyrhynchos
WBGene00000796	crn-3	72	33.585	ENSANAG00000031112	EXOSC10	62	36.680	Aotus_nancymaae
WBGene00000796	crn-3	63	37.696	ENSACLG00000025226	exosc10	65	37.919	Astatotilapia_calliptera
WBGene00000796	crn-3	63	35.640	ENSAMXG00000014510	exosc10	60	35.640	Astyanax_mexicanus
WBGene00000796	crn-3	66	35.225	ENSBTAG00000002590	EXOSC10	82	36.027	Bos_taurus
WBGene00000796	crn-3	79	33.425	ENSCJAG00000002327	EXOSC10	73	33.676	Callithrix_jacchus
WBGene00000796	crn-3	61	35.907	ENSCAFG00000016721	EXOSC10	59	35.907	Canis_familiaris
WBGene00000796	crn-3	61	35.907	ENSCAFG00020002481	EXOSC10	59	35.907	Canis_lupus_dingo
WBGene00000796	crn-3	65	35.117	ENSCHIG00000020022	EXOSC10	68	35.117	Capra_hircus
WBGene00000796	crn-3	72	33.283	ENSTSYG00000006937	EXOSC10	73	33.701	Carlito_syrichta
WBGene00000796	crn-3	65	34.746	ENSCAPG00000006494	EXOSC10	69	34.746	Cavia_aperea
WBGene00000796	crn-3	65	34.746	ENSCPOG00000011628	EXOSC10	66	34.746	Cavia_porcellus
WBGene00000796	crn-3	57	36.641	ENSCCAG00000023223	EXOSC10	64	36.641	Cebus_capucinus
WBGene00000796	crn-3	77	33.524	ENSCATG00000039000	EXOSC10	81	36.823	Cercocebus_atys
WBGene00000796	crn-3	74	33.284	ENSCLAG00000005283	EXOSC10	75	33.432	Chinchilla_lanigera
WBGene00000796	crn-3	74	33.778	ENSCSAG00000000788	EXOSC10	62	36.625	Chlorocebus_sabaeus
WBGene00000796	crn-3	61	36.945	ENSCHOG00000012713	EXOSC10	62	37.011	Choloepus_hoffmanni
WBGene00000796	crn-3	62	38.053	ENSCPBG00000022004	EXOSC10	60	38.628	Chrysemys_picta_bellii
WBGene00000796	crn-3	61	35.357	ENSCSAVG00000009049	-	93	35.357	Ciona_savignyi
WBGene00000796	crn-3	77	33.524	ENSCANG00000042813	EXOSC10	74	34.074	Colobus_angolensis_palliatus
WBGene00000796	crn-3	83	32.061	ENSCGRG00001018469	Exosc10	61	36.266	Cricetulus_griseus_chok1gshd
WBGene00000796	crn-3	83	32.061	ENSCGRG00000002278	Exosc10	62	36.266	Cricetulus_griseus_crigri
WBGene00000796	crn-3	63	38.489	ENSCSEG00000005346	exosc10	62	38.664	Cynoglossus_semilaevis
WBGene00000796	crn-3	63	37.522	ENSCVAG00000016429	exosc10	68	37.610	Cyprinodon_variegatus
WBGene00000796	crn-3	63	35.839	ENSDARG00000037708	exosc10	62	35.478	Danio_rerio
WBGene00000796	crn-3	95	31.257	ENSDNOG00000011301	EXOSC10	74	33.876	Dasypus_novemcinctus
WBGene00000796	crn-3	65	35.254	ENSDORG00000003769	Exosc10	67	35.254	Dipodomys_ordii
WBGene00000796	crn-3	75	32.095	FBgn0038269	Rrp6	70	31.976	Drosophila_melanogaster
WBGene00000796	crn-3	61	36.984	ENSETEG00000000830	EXOSC10	63	36.984	Echinops_telfairi
WBGene00000796	crn-3	74	34.815	ENSEASG00005018716	EXOSC10	78	34.970	Equus_asinus_asinus
WBGene00000796	crn-3	74	34.815	ENSECAG00000011639	EXOSC10	74	33.776	Equus_caballus
WBGene00000796	crn-3	66	32.939	ENSEEUG00000001166	EXOSC10	66	32.939	Erinaceus_europaeus
WBGene00000796	crn-3	63	35.664	ENSELUG00000012870	exosc10	69	36.106	Esox_lucius
WBGene00000796	crn-3	76	32.810	ENSFCAG00000000052	EXOSC10	73	33.234	Felis_catus
WBGene00000796	crn-3	62	37.345	ENSFALG00000010287	EXOSC10	61	37.345	Ficedula_albicollis
WBGene00000796	crn-3	77	32.768	ENSFDAG00000002942	EXOSC10	74	32.991	Fukomys_damarensis
WBGene00000796	crn-3	65	36.735	ENSFHEG00000010678	exosc10	66	37.500	Fundulus_heteroclitus
WBGene00000796	crn-3	60	34.973	ENSGMOG00000006131	exosc10	62	35.953	Gadus_morhua
WBGene00000796	crn-3	63	37.847	ENSGALG00000003086	EXOSC10	73	35.065	Gallus_gallus
WBGene00000796	crn-3	65	36.516	ENSGAFG00000019222	exosc10	68	37.456	Gambusia_affinis
WBGene00000796	crn-3	65	35.859	ENSGACG00000007037	exosc10	64	36.348	Gasterosteus_aculeatus
WBGene00000796	crn-3	63	37.326	ENSGAGG00000000251	EXOSC10	62	38.104	Gopherus_agassizii
WBGene00000796	crn-3	77	33.524	ENSGGOG00000010572	EXOSC10	75	34.077	Gorilla_gorilla
WBGene00000796	crn-3	63	37.716	ENSHBUG00000020328	exosc10	65	37.716	Haplochromis_burtoni
WBGene00000796	crn-3	74	34.384	ENSHGLG00000011944	EXOSC10	75	34.540	Heterocephalus_glaber_female
WBGene00000796	crn-3	74	34.384	ENSHGLG00100014444	EXOSC10	75	34.540	Heterocephalus_glaber_male
WBGene00000796	crn-3	61	37.230	ENSHCOG00000016164	exosc10	61	37.230	Hippocampus_comes
WBGene00000796	crn-3	63	38.475	ENSIPUG00000021971	exosc10	62	38.475	Ictalurus_punctatus
WBGene00000796	crn-3	77	33.475	ENSSTOG00000005459	EXOSC10	75	33.873	Ictidomys_tridecemlineatus
WBGene00000796	crn-3	80	32.789	ENSJJAG00000013716	Exosc10	75	33.929	Jaculus_jaculus
WBGene00000796	crn-3	63	37.544	ENSKMAG00000015540	exosc10	63	37.871	Kryptolebias_marmoratus
WBGene00000796	crn-3	61	36.036	ENSLACG00000016691	EXOSC10	61	36.036	Latimeria_chalumnae
WBGene00000796	crn-3	64	36.271	ENSLOCG00000006443	exosc10	62	36.585	Lepisosteus_oculatus
WBGene00000796	crn-3	61	36.234	ENSLAFG00000016894	EXOSC10	61	36.299	Loxodonta_africana
WBGene00000796	crn-3	77	32.906	ENSMFAG00000038874	EXOSC10	63	36.625	Macaca_fascicularis
WBGene00000796	crn-3	77	32.906	ENSMMUG00000019322	EXOSC10	63	36.625	Macaca_mulatta
WBGene00000796	crn-3	77	32.906	ENSMNEG00000035812	EXOSC10	63	36.625	Macaca_nemestrina
WBGene00000796	crn-3	77	33.524	ENSMLEG00000025160	EXOSC10	75	34.226	Mandrillus_leucophaeus
WBGene00000796	crn-3	94	30.681	ENSMAMG00000019375	exosc10	65	37.522	Mastacembelus_armatus
WBGene00000796	crn-3	63	37.696	ENSMZEG00005013730	exosc10	63	37.696	Maylandia_zebra
WBGene00000796	crn-3	61	38.475	ENSMGAG00000004665	EXOSC10	64	38.475	Meleagris_gallopavo
WBGene00000796	crn-3	61	35.986	ENSMAUG00000019261	Exosc10	88	35.842	Mesocricetus_auratus
WBGene00000796	crn-3	61	36.445	ENSMICG00000003858	EXOSC10	63	36.445	Microcebus_murinus
WBGene00000796	crn-3	61	36.528	ENSMOCG00000016509	Exosc10	88	36.380	Microtus_ochrogaster
WBGene00000796	crn-3	62	37.522	ENSMMOG00000009265	exosc10	66	37.522	Mola_mola
WBGene00000796	crn-3	62	36.204	ENSMODG00000011194	EXOSC10	62	36.380	Monodelphis_domestica
WBGene00000796	crn-3	63	37.762	ENSMALG00000021322	exosc10	63	37.762	Monopterus_albus
WBGene00000796	crn-3	77	33.570	MGP_CAROLIEiJ_G0026802	Exosc10	89	36.332	Mus_caroli
WBGene00000796	crn-3	77	33.621	ENSMUSG00000017264	Exosc10	89	36.332	Mus_musculus
WBGene00000796	crn-3	77	33.046	MGP_PahariEiJ_G0029150	Exosc10	87	36.166	Mus_pahari
WBGene00000796	crn-3	77	33.570	MGP_SPRETEiJ_G0027795	Exosc10	89	36.332	Mus_spretus
WBGene00000796	crn-3	77	33.761	ENSMLUG00000004276	EXOSC10	74	34.370	Myotis_lucifugus
WBGene00000796	crn-3	77	32.759	ENSNGAG00000023829	Exosc10	67	35.076	Nannospalax_galili
WBGene00000796	crn-3	62	38.053	ENSNBRG00000006256	exosc10	66	38.053	Neolamprologus_brichardi
WBGene00000796	crn-3	80	32.830	ENSNLEG00000009539	EXOSC10	73	34.172	Nomascus_leucogenys
WBGene00000796	crn-3	74	34.519	ENSOPRG00000012091	EXOSC10	74	34.519	Ochotona_princeps
WBGene00000796	crn-3	77	32.857	ENSODEG00000013285	EXOSC10	67	34.841	Octodon_degus
WBGene00000796	crn-3	63	36.998	ENSONIG00000002322	exosc10	71	37.522	Oreochromis_niloticus
WBGene00000796	crn-3	60	36.655	ENSOANG00000013322	EXOSC10	61	36.655	Ornithorhynchus_anatinus
WBGene00000796	crn-3	74	34.030	ENSOCUG00000013039	EXOSC10	73	34.030	Oryctolagus_cuniculus
WBGene00000796	crn-3	63	37.347	ENSORLG00000005117	exosc10	63	38.343	Oryzias_latipes
WBGene00000796	crn-3	63	37.852	ENSORLG00020013529	exosc10	76	37.852	Oryzias_latipes_hni
WBGene00000796	crn-3	63	37.173	ENSORLG00015005525	exosc10	66	37.968	Oryzias_latipes_hsok
WBGene00000796	crn-3	63	37.173	ENSOMEG00000003337	exosc10	64	37.809	Oryzias_melastigma
WBGene00000796	crn-3	95	30.459	ENSOARG00000003668	EXOSC10	74	33.236	Ovis_aries
WBGene00000796	crn-3	77	33.524	ENSPPAG00000038356	EXOSC10	75	34.077	Pan_paniscus
WBGene00000796	crn-3	76	32.766	ENSPPRG00000022976	EXOSC10	75	33.333	Panthera_pardus
WBGene00000796	crn-3	76	33.427	ENSPTIG00000012735	EXOSC10	79	34.064	Panthera_tigris_altaica
WBGene00000796	crn-3	77	32.143	ENSPTRG00000000140	EXOSC10	74	32.638	Pan_troglodytes
WBGene00000796	crn-3	77	33.190	ENSPANG00000026088	EXOSC10	75	33.881	Papio_anubis
WBGene00000796	crn-3	63	36.411	ENSPKIG00000013098	exosc10	62	36.760	Paramormyrops_kingsleyae
WBGene00000796	crn-3	62	37.857	ENSPSIG00000005078	EXOSC10	59	38.434	Pelodiscus_sinensis
WBGene00000796	crn-3	63	36.585	ENSPMGG00000022241	exosc10	94	36.713	Periophthalmus_magnuspinnatus
WBGene00000796	crn-3	61	36.166	ENSPEMG00000007753	Exosc10	76	36.022	Peromyscus_maniculatus_bairdii
WBGene00000796	crn-3	55	35.560	ENSPMAG00000006909	exosc10	99	35.560	Petromyzon_marinus
WBGene00000796	crn-3	70	34.150	ENSPCIG00000004840	EXOSC10	88	37.050	Phascolarctos_cinereus
WBGene00000796	crn-3	63	36.842	ENSPFOG00000004744	exosc10	62	37.018	Poecilia_formosa
WBGene00000796	crn-3	65	36.565	ENSPLAG00000010253	exosc10	66	36.735	Poecilia_latipinna
WBGene00000796	crn-3	75	34.559	ENSPMEG00000005740	exosc10	67	36.905	Poecilia_mexicana
WBGene00000796	crn-3	64	37.088	ENSPREG00000016285	exosc10	68	37.478	Poecilia_reticulata
WBGene00000796	crn-3	77	33.666	ENSPPYG00000001891	EXOSC10	71	34.421	Pongo_abelii
WBGene00000796	crn-3	65	35.085	ENSPCOG00000013742	EXOSC10	67	35.085	Propithecus_coquereli
WBGene00000796	crn-3	74	33.284	ENSPVAG00000014780	EXOSC10	74	33.284	Pteropus_vampyrus
WBGene00000796	crn-3	64	37.329	ENSPNYG00000007387	exosc10	67	37.329	Pundamilia_nyererei
WBGene00000796	crn-3	63	36.505	ENSPNAG00000028864	exosc10	62	36.332	Pygocentrus_nattereri
WBGene00000796	crn-3	61	36.266	ENSRNOG00000010719	Exosc10	61	36.266	Rattus_norvegicus
WBGene00000796	crn-3	60	34.070	ENSRBIG00000039772	EXOSC10	61	34.749	Rhinopithecus_bieti
WBGene00000796	crn-3	77	33.524	ENSRROG00000036700	EXOSC10	74	33.432	Rhinopithecus_roxellana
WBGene00000796	crn-3	60	35.935	ENSSBOG00000020768	EXOSC10	65	36.711	Saimiri_boliviensis_boliviensis
WBGene00000796	crn-3	60	36.823	ENSSHAG00000013572	EXOSC10	64	36.673	Sarcophilus_harrisii
WBGene00000796	crn-3	63	36.364	ENSSFOG00015004512	exosc10	64	36.364	Scleropages_formosus
WBGene00000796	crn-3	62	38.420	ENSSMAG00000017318	exosc10	65	38.420	Scophthalmus_maximus
WBGene00000796	crn-3	63	37.587	ENSSDUG00000006646	exosc10	67	37.852	Seriola_dumerili
WBGene00000796	crn-3	63	37.413	ENSSLDG00000025554	exosc10	67	37.676	Seriola_lalandi_dorsalis
WBGene00000796	crn-3	57	36.433	ENSSARG00000013171	EXOSC10	68	36.433	Sorex_araneus
WBGene00000796	crn-3	63	36.713	ENSSPUG00000006844	EXOSC10	90	37.255	Sphenodon_punctatus
WBGene00000796	crn-3	63	37.653	ENSSPAG00000007053	exosc10	62	37.653	Stegastes_partitus
WBGene00000796	crn-3	69	33.803	ENSSSCG00000003412	EXOSC10	76	33.803	Sus_scrofa
WBGene00000796	crn-3	60	37.297	ENSTGUG00000002231	EXOSC10	64	37.297	Taeniopygia_guttata
WBGene00000796	crn-3	96	31.397	ENSTRUG00000012484	exosc10	69	37.112	Takifugu_rubripes
WBGene00000796	crn-3	97	31.479	ENSTNIG00000015181	exosc10	74	35.098	Tetraodon_nigroviridis
WBGene00000796	crn-3	74	34.077	ENSTTRG00000001320	EXOSC10	73	34.077	Tursiops_truncatus
WBGene00000796	crn-3	61	35.548	ENSUAMG00000014404	EXOSC10	65	35.548	Ursus_americanus
WBGene00000796	crn-3	66	35.473	ENSUMAG00000023413	EXOSC10	85	35.284	Ursus_maritimus
WBGene00000796	crn-3	61	36.022	ENSVPAG00000004629	EXOSC10	61	36.022	Vicugna_pacos
WBGene00000796	crn-3	56	35.907	ENSVVUG00000027116	EXOSC10	63	35.564	Vulpes_vulpes
WBGene00000796	crn-3	61	35.587	ENSXETG00000006318	exosc10	62	35.587	Xenopus_tropicalis
WBGene00000796	crn-3	62	36.814	ENSXCOG00000004665	exosc10	67	36.814	Xiphophorus_couchianus
WBGene00000796	crn-3	63	36.538	ENSXMAG00000011246	exosc10	68	36.991	Xiphophorus_maculatus