EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00000890 (Gene tree)
Gene ID: -
Gene Symbol: sig-7
Alias: -
Full Name: Peptidyl-prolyl cis-trans isomerase sig-7
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5327 bases
Position: chrI:8646451-8651777
Accession: G5EEW6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F39H2	RRM_1	PF00076.22	1.2e-14	1	1
F39H2	RRM_1	PF00076.22	1.7e-14	1	1
F39H2	RRM_1	PF00076.22	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F39H2.2b	-	1265	NM_182005	F39H2.2b	358 (aa)	NP_871805	UPI0000086070
F39H2.2a.1	-	1362	NM_059942	F39H2.2a.1	427 (aa)	NP_492343	G5EEW6
F39H2.2a.2	-	1472	NM_059942	F39H2.2a.2	427 (aa)	NP_492343	G5EEW6

Gene Model

Click here to download WBGene00000890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00000890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00000890	sig-7	75	60.748	ENSG00000131013	PPIL4	67	60.000	Homo_sapiens
WBGene00000890	sig-7	75	63.551	ENSAPOG00000005904	ppil4	69	62.727	Acanthochromis_polyacanthus
WBGene00000890	sig-7	77	60.182	ENSAMEG00000018278	PPIL4	66	60.182	Ailuropoda_melanoleuca
WBGene00000890	sig-7	75	62.617	ENSACIG00000006837	ppil4	74	61.818	Amphilophus_citrinellus
WBGene00000890	sig-7	75	63.551	ENSAOCG00000014541	ppil4	76	62.727	Amphiprion_ocellaris
WBGene00000890	sig-7	75	63.551	ENSAPEG00000004245	ppil4	69	62.727	Amphiprion_percula
WBGene00000890	sig-7	75	61.994	ENSATEG00000013141	ppil4	98	59.524	Anabas_testudineus
WBGene00000890	sig-7	73	58.555	ENSAPLG00000008437	PPIL4	69	56.615	Anas_platyrhynchos
WBGene00000890	sig-7	75	59.813	ENSACAG00000006936	PPIL4	67	59.091	Anolis_carolinensis
WBGene00000890	sig-7	75	60.748	ENSANAG00000006499	PPIL4	67	60.000	Aotus_nancymaae
WBGene00000890	sig-7	75	62.617	ENSACLG00000018467	ppil4	73	61.818	Astatotilapia_calliptera
WBGene00000890	sig-7	75	61.059	ENSAMXG00000014167	ppil4	95	58.966	Astyanax_mexicanus
WBGene00000890	sig-7	75	61.059	ENSBTAG00000016980	PPIL4	67	60.303	Bos_taurus
WBGene00000890	sig-7	75	60.748	ENSCAFG00000000379	PPIL4	62	60.000	Canis_familiaris
WBGene00000890	sig-7	75	60.748	ENSCAFG00020013550	PPIL4	83	60.000	Canis_lupus_dingo
WBGene00000890	sig-7	75	61.059	ENSCHIG00000010600	PPIL4	64	60.303	Capra_hircus
WBGene00000890	sig-7	75	61.059	ENSTSYG00000009860	PPIL4	67	60.303	Carlito_syrichta
WBGene00000890	sig-7	56	62.500	ENSCAPG00000004550	PPIL4	57	64.103	Cavia_aperea
WBGene00000890	sig-7	75	61.059	ENSCPOG00000032871	PPIL4	67	60.303	Cavia_porcellus
WBGene00000890	sig-7	75	60.748	ENSCCAG00000022598	PPIL4	67	60.000	Cebus_capucinus
WBGene00000890	sig-7	75	60.748	ENSCATG00000039936	PPIL4	67	60.000	Cercocebus_atys
WBGene00000890	sig-7	75	61.059	ENSCLAG00000003991	PPIL4	67	60.303	Chinchilla_lanigera
WBGene00000890	sig-7	75	60.748	ENSCSAG00000017219	PPIL4	67	60.000	Chlorocebus_sabaeus
WBGene00000890	sig-7	75	59.627	ENSCPBG00000016612	PPIL4	66	59.627	Chrysemys_picta_bellii
WBGene00000890	sig-7	99	49.654	ENSCING00000006773	-	71	57.764	Ciona_intestinalis
WBGene00000890	sig-7	96	50.000	ENSCSAVG00000010619	-	81	48.107	Ciona_savignyi
WBGene00000890	sig-7	75	60.748	ENSCGRG00001019623	Ppil4	67	60.000	Cricetulus_griseus_chok1gshd
WBGene00000890	sig-7	75	60.748	ENSCGRG00000003980	Ppil4	67	60.000	Cricetulus_griseus_crigri
WBGene00000890	sig-7	99	46.868	ENSCSEG00000015812	ppil4	86	51.574	Cynoglossus_semilaevis
WBGene00000890	sig-7	75	62.928	ENSCVAG00000001078	ppil4	70	62.121	Cyprinodon_variegatus
WBGene00000890	sig-7	99	50.220	ENSDARG00000043854	ppil4	72	61.515	Danio_rerio
WBGene00000890	sig-7	75	61.059	ENSDNOG00000040219	PPIL4	67	60.303	Dasypus_novemcinctus
WBGene00000890	sig-7	75	60.748	ENSDORG00000007186	Ppil4	67	60.000	Dipodomys_ordii
WBGene00000890	sig-7	75	60.748	ENSEASG00005008935	PPIL4	67	60.000	Equus_asinus_asinus
WBGene00000890	sig-7	75	60.748	ENSECAG00000021819	PPIL4	67	60.000	Equus_caballus
WBGene00000890	sig-7	75	58.255	ENSEEUG00000000959	PPIL4	67	57.576	Erinaceus_europaeus
WBGene00000890	sig-7	75	63.240	ENSELUG00000018746	ppil4	70	62.424	Esox_lucius
WBGene00000890	sig-7	75	60.748	ENSFCAG00000046720	PPIL4	67	60.000	Felis_catus
WBGene00000890	sig-7	73	58.238	ENSFALG00000013130	PPIL4	64	58.242	Ficedula_albicollis
WBGene00000890	sig-7	75	60.436	ENSFDAG00000008146	PPIL4	67	59.697	Fukomys_damarensis
WBGene00000890	sig-7	75	64.174	ENSFHEG00000011503	ppil4	72	63.333	Fundulus_heteroclitus
WBGene00000890	sig-7	75	60.938	ENSGMOG00000006191	ppil4	81	60.182	Gadus_morhua
WBGene00000890	sig-7	78	59.036	ENSGALG00000012364	PPIL4	65	59.036	Gallus_gallus
WBGene00000890	sig-7	75	63.551	ENSGAFG00000009521	ppil4	76	62.727	Gambusia_affinis
WBGene00000890	sig-7	77	61.818	ENSGACG00000006639	ppil4	69	62.733	Gasterosteus_aculeatus
WBGene00000890	sig-7	75	59.627	ENSGAGG00000005926	PPIL4	85	50.605	Gopherus_agassizii
WBGene00000890	sig-7	75	60.748	ENSGGOG00000009686	PPIL4	67	60.000	Gorilla_gorilla
WBGene00000890	sig-7	96	49.887	ENSHBUG00000021518	ppil4	70	61.818	Haplochromis_burtoni
WBGene00000890	sig-7	75	60.748	ENSHGLG00000007609	PPIL4	67	60.000	Heterocephalus_glaber_female
WBGene00000890	sig-7	75	60.748	ENSHGLG00100008308	PPIL4	67	60.000	Heterocephalus_glaber_male
WBGene00000890	sig-7	75	60.436	ENSIPUG00000006626	PPIL4	69	59.697	Ictalurus_punctatus
WBGene00000890	sig-7	75	61.059	ENSSTOG00000013980	PPIL4	67	60.303	Ictidomys_tridecemlineatus
WBGene00000890	sig-7	75	60.748	ENSJJAG00000017619	Ppil4	67	60.000	Jaculus_jaculus
WBGene00000890	sig-7	75	63.863	ENSKMAG00000014367	ppil4	70	63.030	Kryptolebias_marmoratus
WBGene00000890	sig-7	75	64.486	ENSLBEG00000012172	ppil4	67	63.636	Labrus_bergylta
WBGene00000890	sig-7	98	50.472	ENSLACG00000016551	PPIL4	67	60.000	Latimeria_chalumnae
WBGene00000890	sig-7	75	61.994	ENSLOCG00000017002	ppil4	68	61.212	Lepisosteus_oculatus
WBGene00000890	sig-7	75	56.832	ENSLAFG00000026804	PPIL4	67	56.193	Loxodonta_africana
WBGene00000890	sig-7	75	60.748	ENSMFAG00000032721	PPIL4	67	60.000	Macaca_fascicularis
WBGene00000890	sig-7	75	60.748	ENSMMUG00000023067	PPIL4	67	60.000	Macaca_mulatta
WBGene00000890	sig-7	75	60.748	ENSMNEG00000042362	PPIL4	67	60.000	Macaca_nemestrina
WBGene00000890	sig-7	75	60.748	ENSMLEG00000041942	PPIL4	67	60.000	Mandrillus_leucophaeus
WBGene00000890	sig-7	99	48.291	ENSMAMG00000004525	ppil4	70	61.515	Mastacembelus_armatus
WBGene00000890	sig-7	75	62.617	ENSMZEG00005015546	ppil4	73	61.818	Maylandia_zebra
WBGene00000890	sig-7	77	56.228	ENSMGAG00000012596	PPIL4	69	56.615	Meleagris_gallopavo
WBGene00000890	sig-7	75	60.748	ENSMAUG00000015059	Ppil4	67	60.000	Mesocricetus_auratus
WBGene00000890	sig-7	75	52.336	ENSMICG00000006287	PPIL4	63	51.976	Microcebus_murinus
WBGene00000890	sig-7	75	60.748	ENSMOCG00000012720	-	67	60.000	Microtus_ochrogaster
WBGene00000890	sig-7	75	51.090	ENSMOCG00000000256	-	63	52.121	Microtus_ochrogaster
WBGene00000890	sig-7	78	60.241	ENSMMOG00000014859	ppil4	73	60.241	Mola_mola
WBGene00000890	sig-7	75	61.801	ENSMODG00000016825	PPIL4	66	61.801	Monodelphis_domestica
WBGene00000890	sig-7	97	52.644	ENSMALG00000018887	ppil4	69	61.515	Monopterus_albus
WBGene00000890	sig-7	75	60.436	MGP_CAROLIEiJ_G0015103	Ppil4	67	59.697	Mus_caroli
WBGene00000890	sig-7	75	60.748	ENSMUSG00000015757	Ppil4	67	60.000	Mus_musculus
WBGene00000890	sig-7	75	60.748	MGP_PahariEiJ_G0023722	Ppil4	67	60.000	Mus_pahari
WBGene00000890	sig-7	75	60.748	MGP_SPRETEiJ_G0015910	Ppil4	67	60.000	Mus_spretus
WBGene00000890	sig-7	75	60.748	ENSMPUG00000018073	PPIL4	67	60.000	Mustela_putorius_furo
WBGene00000890	sig-7	87	55.228	ENSMLUG00000002766	PPIL4	66	60.182	Myotis_lucifugus
WBGene00000890	sig-7	87	55.228	ENSNGAG00000008801	Ppil4	67	59.639	Nannospalax_galili
WBGene00000890	sig-7	75	62.617	ENSNBRG00000010947	ppil4	70	61.818	Neolamprologus_brichardi
WBGene00000890	sig-7	75	60.748	ENSNLEG00000015316	PPIL4	77	60.000	Nomascus_leucogenys
WBGene00000890	sig-7	75	60.748	ENSODEG00000002499	PPIL4	67	60.000	Octodon_degus
WBGene00000890	sig-7	75	62.617	ENSONIG00000011400	ppil4	80	61.818	Oreochromis_niloticus
WBGene00000890	sig-7	75	60.748	ENSOCUG00000007696	PPIL4	67	60.000	Oryctolagus_cuniculus
WBGene00000890	sig-7	75	62.617	ENSORLG00000015310	ppil4	85	52.812	Oryzias_latipes
WBGene00000890	sig-7	75	62.617	ENSORLG00020008558	ppil4	93	60.000	Oryzias_latipes_hni
WBGene00000890	sig-7	98	51.896	ENSORLG00015003655	ppil4	93	60.000	Oryzias_latipes_hsok
WBGene00000890	sig-7	75	62.617	ENSOMEG00000011713	ppil4	96	61.034	Oryzias_melastigma
WBGene00000890	sig-7	75	52.648	ENSOGAG00000025753	-	68	52.121	Otolemur_garnettii
WBGene00000890	sig-7	87	55.496	ENSOGAG00000014153	-	71	60.486	Otolemur_garnettii
WBGene00000890	sig-7	75	61.059	ENSOARG00000002675	PPIL4	67	60.303	Ovis_aries
WBGene00000890	sig-7	75	60.748	ENSPPAG00000042154	PPIL4	67	60.000	Pan_paniscus
WBGene00000890	sig-7	75	60.748	ENSPPRG00000004682	PPIL4	67	60.000	Panthera_pardus
WBGene00000890	sig-7	72	60.065	ENSPTIG00000014238	PPIL4	53	59.306	Panthera_tigris_altaica
WBGene00000890	sig-7	75	60.748	ENSPTRG00000018692	PPIL4	67	60.000	Pan_troglodytes
WBGene00000890	sig-7	75	60.748	ENSPANG00000017996	PPIL4	67	60.000	Papio_anubis
WBGene00000890	sig-7	75	63.551	ENSPKIG00000019748	ppil4	95	62.069	Paramormyrops_kingsleyae
WBGene00000890	sig-7	63	60.793	ENSPSIG00000016651	PPIL4	79	49.351	Pelodiscus_sinensis
WBGene00000890	sig-7	75	63.043	ENSPMGG00000002277	ppil4	72	63.043	Periophthalmus_magnuspinnatus
WBGene00000890	sig-7	75	60.748	ENSPEMG00000010912	Ppil4	67	60.000	Peromyscus_maniculatus_bairdii
WBGene00000890	sig-7	75	61.801	ENSPCIG00000025561	PPIL4	70	61.801	Phascolarctos_cinereus
WBGene00000890	sig-7	75	63.863	ENSPFOG00000004145	ppil4	69	63.030	Poecilia_formosa
WBGene00000890	sig-7	75	63.863	ENSPLAG00000001207	ppil4	70	63.030	Poecilia_latipinna
WBGene00000890	sig-7	75	63.863	ENSPMEG00000009249	ppil4	97	62.414	Poecilia_mexicana
WBGene00000890	sig-7	75	63.551	ENSPREG00000020355	ppil4	69	62.727	Poecilia_reticulata
WBGene00000890	sig-7	76	47.810	ENSPPYG00000017785	-	71	47.962	Pongo_abelii
WBGene00000890	sig-7	75	60.748	ENSPPYG00000029525	-	89	60.000	Pongo_abelii
WBGene00000890	sig-7	75	61.059	ENSPCOG00000016997	PPIL4	67	60.303	Propithecus_coquereli
WBGene00000890	sig-7	75	60.748	ENSPVAG00000000746	PPIL4	67	60.000	Pteropus_vampyrus
WBGene00000890	sig-7	75	62.617	ENSPNYG00000010608	ppil4	73	61.818	Pundamilia_nyererei
WBGene00000890	sig-7	75	61.371	ENSPNAG00000002199	ppil4	68	60.606	Pygocentrus_nattereri
WBGene00000890	sig-7	75	60.748	ENSRNOG00000015552	Ppil4	67	60.000	Rattus_norvegicus
WBGene00000890	sig-7	79	59.524	ENSRBIG00000043467	PPIL4	69	59.524	Rhinopithecus_bieti
WBGene00000890	sig-7	75	60.748	ENSRROG00000002923	PPIL4	67	60.000	Rhinopithecus_roxellana
WBGene00000890	sig-7	75	61.801	ENSSHAG00000017140	PPIL4	66	61.801	Sarcophilus_harrisii
WBGene00000890	sig-7	97	49.237	ENSSFOG00015020750	ppil4	73	60.303	Scleropages_formosus
WBGene00000890	sig-7	75	62.617	ENSSMAG00000017653	ppil4	100	59.136	Scophthalmus_maximus
WBGene00000890	sig-7	99	50.676	ENSSDUG00000010647	ppil4	74	61.212	Seriola_dumerili
WBGene00000890	sig-7	75	61.994	ENSSLDG00000021975	ppil4	74	61.212	Seriola_lalandi_dorsalis
WBGene00000890	sig-7	77	58.610	ENSSARG00000011244	PPIL4	66	58.788	Sorex_araneus
WBGene00000890	sig-7	85	55.801	ENSSPUG00000005655	PPIL4	77	57.849	Sphenodon_punctatus
WBGene00000890	sig-7	75	63.240	ENSSPAG00000017442	ppil4	76	62.424	Stegastes_partitus
WBGene00000890	sig-7	75	60.748	ENSSSCG00000028867	PPIL4	67	60.000	Sus_scrofa
WBGene00000890	sig-7	77	59.091	ENSTGUG00000010655	-	68	59.091	Taeniopygia_guttata
WBGene00000890	sig-7	99	50.562	ENSTRUG00000006670	ppil4	91	58.020	Takifugu_rubripes
WBGene00000890	sig-7	90	51.918	ENSTNIG00000002706	ppil4	82	58.333	Tetraodon_nigroviridis
WBGene00000890	sig-7	70	57.143	ENSTTRG00000006014	PPIL4	67	49.697	Tursiops_truncatus
WBGene00000890	sig-7	72	58.576	ENSUMAG00000002774	PPIL4	63	59.344	Ursus_maritimus
WBGene00000890	sig-7	75	60.748	ENSVPAG00000005157	PPIL4	67	60.000	Vicugna_pacos
WBGene00000890	sig-7	75	60.748	ENSVVUG00000005119	PPIL4	62	60.000	Vulpes_vulpes
WBGene00000890	sig-7	99	47.761	ENSXETG00000021385	ppil4	70	60.000	Xenopus_tropicalis
WBGene00000890	sig-7	75	64.174	ENSXCOG00000001316	ppil4	73	63.030	Xiphophorus_couchianus
WBGene00000890	sig-7	75	63.863	ENSXMAG00000004998	ppil4	73	63.030	Xiphophorus_maculatus