EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00000939 (Gene tree)
Gene ID: -
Gene Symbol: dcr-1
Alias: -
Full Name: Endoribonuclease dcr-1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 8366 bases
Position: chrIII:8071916-8080281
Accession: P34529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K12H4	Ribonuclease_3	PF00636.26	1.1e-59	1	2
K12H4	Ribonuclease_3	PF00636.26	1.1e-59	2	2
K12H4	Ribonuclease_3	PF00636.26	1.1e-59	1	2
K12H4	Ribonuclease_3	PF00636.26	1.1e-59	2	2
K12H4	PAZ	PF02170.22	3.5e-46	1	1
K12H4	PAZ	PF02170.22	3.5e-46	1	1
K12H4	Ribonucleas_3_3	PF14622.6	2e-23	1	1
K12H4	Ribonucleas_3_3	PF14622.6	2e-23	1	1
K12H4	ResIII	PF04851.15	4.3e-13	1	1
K12H4	ResIII	PF04851.15	4.3e-13	1	1
K12H4	DEAD	PF00270.29	8.3e-13	1	1
K12H4	DEAD	PF00270.29	8.3e-13	1	1
K12H4	Dicer_dimer	PF03368.14	9.8e-25	1	1
K12H4	Dicer_dimer	PF03368.14	9.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K12H4.8.2	-	5927	NM_066360	K12H4.8.2	1910 (aa)	NP_498761	P34529
K12H4.8.1	-	5883	NM_066360	K12H4.8.1	1910 (aa)	NP_498761	P34529

Gene Model

Click here to download WBGene00000939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00000939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00000939	dcr-1	80	53.906	ENSG00000100697	DICER1	82	53.906	Homo_sapiens
WBGene00000939	dcr-1	77	59.804	ENSAPOG00000020381	dicer1	82	50.806	Acanthochromis_polyacanthus
WBGene00000939	dcr-1	79	57.143	ENSAMEG00000006447	DICER1	82	50.365	Ailuropoda_melanoleuca
WBGene00000939	dcr-1	74	53.279	ENSACIG00000000890	dicer1	78	53.279	Amphilophus_citrinellus
WBGene00000939	dcr-1	77	59.804	ENSAOCG00000023381	dicer1	83	47.260	Amphiprion_ocellaris
WBGene00000939	dcr-1	79	59.804	ENSAPEG00000022809	dicer1	83	46.575	Amphiprion_percula
WBGene00000939	dcr-1	78	55.556	ENSATEG00000014048	dicer1	79	55.556	Anabas_testudineus
WBGene00000939	dcr-1	81	51.370	ENSAPLG00000012407	DICER1	84	46.081	Anas_platyrhynchos
WBGene00000939	dcr-1	81	52.518	ENSACAG00000013033	DICER1	83	52.518	Anolis_carolinensis
WBGene00000939	dcr-1	80	53.906	ENSANAG00000023622	DICER1	82	53.906	Aotus_nancymaae
WBGene00000939	dcr-1	79	51.163	ENSACLG00000007920	dicer1	81	50.815	Astatotilapia_calliptera
WBGene00000939	dcr-1	80	52.459	ENSAMXG00000010730	dicer1	82	52.459	Astyanax_mexicanus
WBGene00000939	dcr-1	79	56.637	ENSBTAG00000012852	DICER1	82	56.637	Bos_taurus
WBGene00000939	dcr-1	80	53.906	ENSCJAG00000006225	DICER1	82	53.906	Callithrix_jacchus
WBGene00000939	dcr-1	78	60.825	ENSCAFG00000017701	DICER1	80	60.825	Canis_familiaris
WBGene00000939	dcr-1	78	60.825	ENSCAFG00020014247	DICER1	80	60.825	Canis_lupus_dingo
WBGene00000939	dcr-1	79	56.637	ENSCHIG00000015885	DICER1	81	56.637	Capra_hircus
WBGene00000939	dcr-1	68	61.111	ENSTSYG00000002044	DICER1	73	61.111	Carlito_syrichta
WBGene00000939	dcr-1	82	50.000	ENSCAPG00000000101	DICER1	87	46.259	Cavia_aperea
WBGene00000939	dcr-1	84	41.835	ENSCPOG00000004221	DICER1	91	41.835	Cavia_porcellus
WBGene00000939	dcr-1	80	53.906	ENSCCAG00000027063	DICER1	82	53.906	Cebus_capucinus
WBGene00000939	dcr-1	80	53.906	ENSCATG00000031403	DICER1	82	53.906	Cercocebus_atys
WBGene00000939	dcr-1	84	51.825	ENSCLAG00000015000	DICER1	87	51.825	Chinchilla_lanigera
WBGene00000939	dcr-1	80	53.906	ENSCSAG00000010696	DICER1	82	53.906	Chlorocebus_sabaeus
WBGene00000939	dcr-1	81	50.685	ENSCPBG00000009859	DICER1	84	45.952	Chrysemys_picta_bellii
WBGene00000939	dcr-1	80	40.099	ENSCING00000008383	-	88	40.429	Ciona_intestinalis
WBGene00000939	dcr-1	51	50.000	ENSCSAVG00000006137	-	92	38.584	Ciona_savignyi
WBGene00000939	dcr-1	80	53.906	ENSCANG00000031429	DICER1	82	53.077	Colobus_angolensis_palliatus
WBGene00000939	dcr-1	79	55.462	ENSCGRG00001008088	Dicer1	82	55.462	Cricetulus_griseus_chok1gshd
WBGene00000939	dcr-1	79	55.462	ENSCGRG00000012281	Dicer1	82	55.462	Cricetulus_griseus_crigri
WBGene00000939	dcr-1	80	51.938	ENSCSEG00000017078	dicer1	83	51.938	Cynoglossus_semilaevis
WBGene00000939	dcr-1	78	53.659	ENSCVAG00000020035	dicer1	81	53.659	Cyprinodon_variegatus
WBGene00000939	dcr-1	78	54.701	ENSDARG00000001129	dicer1	81	54.701	Danio_rerio
WBGene00000939	dcr-1	80	53.077	ENSDNOG00000004190	DICER1	83	50.000	Dasypus_novemcinctus
WBGene00000939	dcr-1	77	60.825	ENSDORG00000006215	Dicer1	86	42.880	Dipodomys_ordii
WBGene00000939	dcr-1	82	45.269	FBgn0039016	Dcr-1	71	45.455	Drosophila_melanogaster
WBGene00000939	dcr-1	62	59.211	ENSETEG00000011000	DICER1	69	59.211	Echinops_telfairi
WBGene00000939	dcr-1	77	59.794	ENSEBUG00000013802	dicer1	78	59.794	Eptatretus_burgeri
WBGene00000939	dcr-1	80	51.095	ENSEASG00005021485	DICER1	84	46.099	Equus_asinus_asinus
WBGene00000939	dcr-1	80	51.095	ENSECAG00000006079	DICER1	83	51.095	Equus_caballus
WBGene00000939	dcr-1	80	44.178	ENSELUG00000024317	dicer1	85	44.692	Esox_lucius
WBGene00000939	dcr-1	79	57.143	ENSFCAG00000003535	DICER1	83	46.667	Felis_catus
WBGene00000939	dcr-1	82	46.243	ENSFALG00000002516	DICER1	84	46.243	Ficedula_albicollis
WBGene00000939	dcr-1	82	57.143	ENSFDAG00000021287	DICER1	86	56.140	Fukomys_damarensis
WBGene00000939	dcr-1	78	59.223	ENSFHEG00000016839	dicer1	84	47.826	Fundulus_heteroclitus
WBGene00000939	dcr-1	75	50.815	ENSGMOG00000006057	dicer1	77	50.815	Gadus_morhua
WBGene00000939	dcr-1	80	52.985	ENSGALG00000010999	DICER1	86	46.555	Gallus_gallus
WBGene00000939	dcr-1	81	54.098	ENSGAFG00000010728	dicer1	86	54.098	Gambusia_affinis
WBGene00000939	dcr-1	78	55.372	ENSGACG00000020134	dicer1	80	55.372	Gasterosteus_aculeatus
WBGene00000939	dcr-1	80	53.906	ENSGGOG00000003760	DICER1	82	53.906	Gorilla_gorilla
WBGene00000939	dcr-1	79	51.163	ENSHBUG00000018941	dicer1	81	50.815	Haplochromis_burtoni
WBGene00000939	dcr-1	83	53.906	ENSHGLG00000018124	DICER1	82	53.077	Heterocephalus_glaber_female
WBGene00000939	dcr-1	83	53.906	ENSHGLG00100010985	DICER1	82	53.077	Heterocephalus_glaber_male
WBGene00000939	dcr-1	78	53.846	ENSHCOG00000015738	dicer1	80	53.846	Hippocampus_comes
WBGene00000939	dcr-1	79	51.587	ENSIPUG00000005080	dicer1	81	50.388	Ictalurus_punctatus
WBGene00000939	dcr-1	81	49.640	ENSSTOG00000022439	DICER1	84	45.952	Ictidomys_tridecemlineatus
WBGene00000939	dcr-1	82	56.140	ENSJJAG00000010766	Dicer1	87	46.405	Jaculus_jaculus
WBGene00000939	dcr-1	72	58.036	ENSKMAG00000001429	dicer1	83	58.036	Kryptolebias_marmoratus
WBGene00000939	dcr-1	78	54.918	ENSLBEG00000008928	dicer1	79	54.918	Labrus_bergylta
WBGene00000939	dcr-1	79	60.825	ENSLACG00000008302	DICER1	81	60.825	Latimeria_chalumnae
WBGene00000939	dcr-1	78	54.472	ENSLOCG00000008544	dicer1	80	50.815	Lepisosteus_oculatus
WBGene00000939	dcr-1	80	51.852	ENSLAFG00000013632	DICER1	84	47.682	Loxodonta_africana
WBGene00000939	dcr-1	80	53.906	ENSMFAG00000002987	DICER1	82	53.906	Macaca_fascicularis
WBGene00000939	dcr-1	80	53.906	ENSMMUG00000023305	DICER1	82	53.906	Macaca_mulatta
WBGene00000939	dcr-1	80	53.906	ENSMNEG00000021073	DICER1	82	53.906	Macaca_nemestrina
WBGene00000939	dcr-1	80	53.906	ENSMLEG00000034800	DICER1	82	53.906	Mandrillus_leucophaeus
WBGene00000939	dcr-1	79	52.713	ENSMAMG00000016806	dicer1	81	50.269	Mastacembelus_armatus
WBGene00000939	dcr-1	79	51.163	ENSMZEG00005016989	dicer1	81	50.815	Maylandia_zebra
WBGene00000939	dcr-1	81	50.685	ENSMGAG00000013207	DICER1	84	46.209	Meleagris_gallopavo
WBGene00000939	dcr-1	79	56.637	ENSMAUG00000009936	Dicer1	81	56.637	Mesocricetus_auratus
WBGene00000939	dcr-1	81	50.000	ENSMICG00000011690	DICER1	82	54.688	Microcebus_murinus
WBGene00000939	dcr-1	81	47.205	ENSMOCG00000018636	Dicer1	84	47.205	Microtus_ochrogaster
WBGene00000939	dcr-1	78	52.800	ENSMMOG00000018531	dicer1	81	51.128	Mola_mola
WBGene00000939	dcr-1	81	52.778	ENSMODG00000012624	DICER1	84	46.209	Monodelphis_domestica
WBGene00000939	dcr-1	79	54.098	ENSMALG00000009445	dicer1	79	54.098	Monopterus_albus
WBGene00000939	dcr-1	79	56.637	ENSMUSG00000041415	Dicer1	82	56.637	Mus_musculus
WBGene00000939	dcr-1	80	50.365	ENSMPUG00000003130	DICER1	83	50.365	Mustela_putorius_furo
WBGene00000939	dcr-1	81	50.000	ENSMLUG00000003991	DICER1	82	50.000	Myotis_lucifugus
WBGene00000939	dcr-1	84	42.081	ENSNGAG00000010103	Dicer1	91	42.587	Nannospalax_galili
WBGene00000939	dcr-1	78	50.815	ENSNBRG00000022306	dicer1	80	51.381	Neolamprologus_brichardi
WBGene00000939	dcr-1	80	53.906	ENSNLEG00000017309	DICER1	82	53.906	Nomascus_leucogenys
WBGene00000939	dcr-1	62	57.522	ENSMEUG00000000614	-	69	57.522	Notamacropus_eugenii
WBGene00000939	dcr-1	74	56.250	ENSOPRG00000014698	DICER1	77	51.079	Ochotona_princeps
WBGene00000939	dcr-1	80	53.906	ENSODEG00000008594	DICER1	83	48.980	Octodon_degus
WBGene00000939	dcr-1	78	56.881	ENSONIG00000010424	dicer1	80	48.072	Oreochromis_niloticus
WBGene00000939	dcr-1	81	53.788	ENSOANG00000012034	DICER1	87	40.895	Ornithorhynchus_anatinus
WBGene00000939	dcr-1	78	57.273	ENSOCUG00000010849	DICER1	79	60.825	Oryctolagus_cuniculus
WBGene00000939	dcr-1	78	54.622	ENSORLG00000011022	dicer1	80	54.622	Oryzias_latipes
WBGene00000939	dcr-1	78	54.622	ENSORLG00020021795	dicer1	80	54.622	Oryzias_latipes_hni
WBGene00000939	dcr-1	78	54.622	ENSORLG00015019667	dicer1	80	54.622	Oryzias_latipes_hsok
WBGene00000939	dcr-1	78	54.622	ENSOMEG00000018679	dicer1	81	54.622	Oryzias_melastigma
WBGene00000939	dcr-1	73	50.000	ENSOGAG00000010719	DICER1	79	49.660	Otolemur_garnettii
WBGene00000939	dcr-1	79	56.637	ENSOARG00000015465	DICER1	81	56.637	Ovis_aries
WBGene00000939	dcr-1	80	53.906	ENSPPAG00000035143	DICER1	81	57.143	Pan_paniscus
WBGene00000939	dcr-1	79	57.143	ENSPPRG00000001322	DICER1	83	46.667	Panthera_pardus
WBGene00000939	dcr-1	79	57.143	ENSPTIG00000008215	DICER1	83	46.667	Panthera_tigris_altaica
WBGene00000939	dcr-1	80	53.906	ENSPTRG00000023484	DICER1	82	53.906	Pan_troglodytes
WBGene00000939	dcr-1	80	53.906	ENSPANG00000023078	DICER1	83	48.993	Papio_anubis
WBGene00000939	dcr-1	78	57.143	ENSPKIG00000019962	dicer1	79	57.143	Paramormyrops_kingsleyae
WBGene00000939	dcr-1	81	49.315	ENSPSIG00000010801	DICER1	84	44.550	Pelodiscus_sinensis
WBGene00000939	dcr-1	79	52.459	ENSPMGG00000010210	dicer1	82	52.459	Periophthalmus_magnuspinnatus
WBGene00000939	dcr-1	79	56.637	ENSPEMG00000014125	Dicer1	81	56.637	Peromyscus_maniculatus_bairdii
WBGene00000939	dcr-1	81	53.333	ENSPCIG00000018004	DICER1	84	46.209	Phascolarctos_cinereus
WBGene00000939	dcr-1	79	54.098	ENSPFOG00000008531	dicer1	81	54.098	Poecilia_formosa
WBGene00000939	dcr-1	79	54.098	ENSPLAG00000008539	dicer1	80	54.098	Poecilia_latipinna
WBGene00000939	dcr-1	79	54.098	ENSPMEG00000014284	dicer1	81	54.098	Poecilia_mexicana
WBGene00000939	dcr-1	79	53.659	ENSPREG00000012120	dicer1	82	53.659	Poecilia_reticulata
WBGene00000939	dcr-1	80	53.906	ENSPPYG00000006112	DICER1	82	53.906	Pongo_abelii
WBGene00000939	dcr-1	65	60.000	ENSPCAG00000010828	DICER1	68	60.000	Procavia_capensis
WBGene00000939	dcr-1	81	50.000	ENSPCOG00000022909	DICER1	82	54.688	Propithecus_coquereli
WBGene00000939	dcr-1	77	53.125	ENSPVAG00000004811	DICER1	85	47.436	Pteropus_vampyrus
WBGene00000939	dcr-1	79	51.163	ENSPNYG00000017939	dicer1	81	50.815	Pundamilia_nyererei
WBGene00000939	dcr-1	80	52.459	ENSPNAG00000001012	dicer1	81	54.701	Pygocentrus_nattereri
WBGene00000939	dcr-1	79	54.545	ENSRNOG00000010711	Dicer1	83	46.377	Rattus_norvegicus
WBGene00000939	dcr-1	81	49.306	ENSRBIG00000020932	DICER1	82	53.077	Rhinopithecus_bieti
WBGene00000939	dcr-1	80	53.906	ENSRROG00000031891	DICER1	82	53.906	Rhinopithecus_roxellana
WBGene00000939	dcr-1	80	53.906	ENSSBOG00000028660	DICER1	82	53.906	Saimiri_boliviensis_boliviensis
WBGene00000939	dcr-1	81	54.074	ENSSHAG00000012077	DICER1	84	46.445	Sarcophilus_harrisii
WBGene00000939	dcr-1	78	53.279	ENSSFOG00015010804	dicer1	85	53.279	Scleropages_formosus
WBGene00000939	dcr-1	78	54.167	ENSSMAG00000015520	dicer1	80	50.409	Scophthalmus_maximus
WBGene00000939	dcr-1	78	53.279	ENSSDUG00000021652	dicer1	79	53.279	Seriola_dumerili
WBGene00000939	dcr-1	75	53.279	ENSSLDG00000012087	dicer1	79	53.279	Seriola_lalandi_dorsalis
WBGene00000939	dcr-1	80	53.719	ENSSPUG00000016222	DICER1	82	53.719	Sphenodon_punctatus
WBGene00000939	dcr-1	81	50.382	ENSSPAG00000017128	dicer1	83	50.382	Stegastes_partitus
WBGene00000939	dcr-1	79	57.143	ENSSSCG00000028225	DICER1	81	56.140	Sus_scrofa
WBGene00000939	dcr-1	82	46.243	ENSTGUG00000012658	DICER1	84	46.243	Taeniopygia_guttata
WBGene00000939	dcr-1	78	60.396	ENSTRUG00000006156	dicer1	81	60.396	Takifugu_rubripes
WBGene00000939	dcr-1	79	52.344	ENSTNIG00000005441	dicer1	81	52.344	Tetraodon_nigroviridis
WBGene00000939	dcr-1	75	56.164	ENSTBEG00000012374	DICER1	84	47.134	Tupaia_belangeri
WBGene00000939	dcr-1	73	56.637	ENSTTRG00000013044	DICER1	75	56.637	Tursiops_truncatus
WBGene00000939	dcr-1	78	50.365	ENSUAMG00000011912	DICER1	83	46.405	Ursus_americanus
WBGene00000939	dcr-1	80	50.365	ENSUMAG00000003027	DICER1	82	50.365	Ursus_maritimus
WBGene00000939	dcr-1	70	60.000	ENSVPAG00000006817	DICER1	75	60.000	Vicugna_pacos
WBGene00000939	dcr-1	80	57.143	ENSVVUG00000018855	DICER1	81	58.209	Vulpes_vulpes
WBGene00000939	dcr-1	82	47.949	ENSXETG00000023315	dicer1	88	45.694	Xenopus_tropicalis
WBGene00000939	dcr-1	71	58.482	ENSXCOG00000009353	dicer1	79	58.482	Xiphophorus_couchianus
WBGene00000939	dcr-1	79	54.098	ENSXMAG00000015721	dicer1	81	54.098	Xiphophorus_maculatus