EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001050 (Gene tree)
Gene ID: -
Gene Symbol: dom-3
Alias: -
Full Name: Decapping nuclease dom-3
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1813 bases
Position: chrI:5003351-5005163
Accession: Q10660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F54C1	RAI1	PF08652.11	3.1e-10	1	1
F54C1	RAI1	PF08652.11	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F54C1.2.2	-	1249	NM_059095	F54C1.2.2	393 (aa)	NP_491496	Q10660
F54C1.2.1	-	1345	NM_059095	F54C1.2.1	393 (aa)	NP_491496	Q10660

Gene Model

Click here to download WBGene00001050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001050	dom-3	82	30.460	ENSCHIG00000024555	DXO	83	30.460	Capra_hircus
WBGene00001050	dom-3	86	30.312	ENSHCOG00000013410	-	88	30.312	Hippocampus_comes
WBGene00001050	dom-3	63	32.714	MGP_CAROLIEiJ_G0021476	Dxo	97	32.759	Mus_caroli
WBGene00001050	dom-3	63	32.714	ENSMUSG00000040482	Dxo	97	32.759	Mus_musculus
WBGene00001050	dom-3	63	33.086	MGP_PahariEiJ_G0020471	Dxo	97	33.621	Mus_pahari
WBGene00001050	dom-3	63	32.714	MGP_SPRETEiJ_G0022381	Dxo	97	32.759	Mus_spretus
WBGene00001050	dom-3	60	31.349	ENSNBRG00000001675	DXO	57	31.349	Neolamprologus_brichardi
WBGene00001050	dom-3	60	30.709	ENSORLG00020018952	DXO	58	30.709	Oryzias_latipes_hni
WBGene00001050	dom-3	60	32.031	ENSPFOG00000004778	DXO	58	32.031	Poecilia_formosa
WBGene00001050	dom-3	60	32.031	ENSPLAG00000015246	DXO	58	32.031	Poecilia_latipinna
WBGene00001050	dom-3	60	32.031	ENSPMEG00000001371	DXO	58	32.031	Poecilia_mexicana
WBGene00001050	dom-3	73	30.097	ENSUMAG00000012641	DXO	89	30.097	Ursus_maritimus