EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001225 (Gene tree)
Gene ID: -
Gene Symbol: eif-3.B
Alias: -
Full Name: Eukaryotic translation initiation factor 3 subunit B
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 2821 bases
Position: chrII:14795404-14798224
Accession: Q9XWI6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54E2A	eIF2A	PF08662.11	8.7e-22	1	1
Y54E2A	eIF2A	PF08662.11	8.7e-22	1	1
Y54E2A	eIF2A	PF08662.11	8.7e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54E2A.11b	-	1039	-	Y54E2A.11b	193 (aa)	NP_001022470	UPI00029991E3
Y54E2A.11a.3	-	2578	NM_001027298	Y54E2A.11a.3	725 (aa)	NP_001022469	Q9XWI6
Y54E2A.11a.2	-	2583	NM_001027298	Y54E2A.11a.2	725 (aa)	NP_001022469	Q9XWI6
Y54E2A.11a.1	-	2315	NM_001027298	Y54E2A.11a.1	725 (aa)	NP_001022469	Q9XWI6

Gene Model

Click here to download WBGene00001225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001225	eif-3.B	98	34.081	ENSG00000106263	EIF3B	93	41.290	Homo_sapiens
WBGene00001225	eif-3.B	97	33.759	ENSAPOG00000002297	eif3bb	99	33.705	Acanthochromis_polyacanthus
WBGene00001225	eif-3.B	95	32.464	ENSACIG00000015396	eif3bb	99	33.008	Amphilophus_citrinellus
WBGene00001225	eif-3.B	97	33.759	ENSAOCG00000010921	eif3bb	99	33.705	Amphiprion_ocellaris
WBGene00001225	eif-3.B	97	33.759	ENSAPEG00000000844	eif3bb	99	33.705	Amphiprion_percula
WBGene00001225	eif-3.B	97	33.333	ENSATEG00000008626	eif3bb	99	33.287	Anabas_testudineus
WBGene00001225	eif-3.B	96	33.285	ENSAPLG00000016062	EIF3B	97	33.333	Anas_platyrhynchos
WBGene00001225	eif-3.B	95	33.238	ENSACAG00000008874	-	74	33.521	Anolis_carolinensis
WBGene00001225	eif-3.B	98	34.081	ENSANAG00000020360	EIF3B	83	34.081	Aotus_nancymaae
WBGene00001225	eif-3.B	95	31.924	ENSACLG00000000870	eif3bb	99	32.730	Astatotilapia_calliptera
WBGene00001225	eif-3.B	99	33.194	ENSAMXG00000009773	eif3ba	98	33.240	Astyanax_mexicanus
WBGene00001225	eif-3.B	98	33.801	ENSBTAG00000007474	EIF3B	85	33.801	Bos_taurus
WBGene00001225	eif-3.B	98	34.081	ENSCJAG00000001442	EIF3B	82	34.081	Callithrix_jacchus
WBGene00001225	eif-3.B	98	33.992	ENSCAFG00000016418	EIF3B	82	33.941	Canis_familiaris
WBGene00001225	eif-3.B	98	33.850	ENSCAFG00020020771	EIF3B	85	33.801	Canis_lupus_dingo
WBGene00001225	eif-3.B	98	33.801	ENSCHIG00000009941	EIF3B	85	33.801	Capra_hircus
WBGene00001225	eif-3.B	98	32.725	ENSTSYG00000008256	EIF3B	95	32.899	Carlito_syrichta
WBGene00001225	eif-3.B	92	32.440	ENSCAPG00000006394	-	99	32.440	Cavia_aperea
WBGene00001225	eif-3.B	99	33.936	ENSCPOG00000012541	-	85	33.936	Cavia_porcellus
WBGene00001225	eif-3.B	99	34.449	ENSCPOG00000031410	-	85	34.449	Cavia_porcellus
WBGene00001225	eif-3.B	98	34.081	ENSCCAG00000021556	EIF3B	96	34.073	Cebus_capucinus
WBGene00001225	eif-3.B	98	34.081	ENSCATG00000040107	EIF3B	82	34.081	Cercocebus_atys
WBGene00001225	eif-3.B	99	34.075	ENSCLAG00000006140	EIF3B	85	34.075	Chinchilla_lanigera
WBGene00001225	eif-3.B	98	32.398	ENSCSAG00000017603	EIF3B	72	34.076	Chlorocebus_sabaeus
WBGene00001225	eif-3.B	96	34.043	ENSCPBG00000020654	EIF3B	85	34.177	Chrysemys_picta_bellii
WBGene00001225	eif-3.B	96	33.142	ENSCING00000003620	-	96	32.682	Ciona_intestinalis
WBGene00001225	eif-3.B	98	34.081	ENSCANG00000042097	EIF3B	96	34.081	Colobus_angolensis_palliatus
WBGene00001225	eif-3.B	98	34.081	ENSCGRG00001019278	Eif3b	84	34.081	Cricetulus_griseus_chok1gshd
WBGene00001225	eif-3.B	98	34.081	ENSCGRG00000004618	Eif3b	83	34.081	Cricetulus_griseus_crigri
WBGene00001225	eif-3.B	96	33.475	ENSCSEG00000020931	eif3bb	99	33.426	Cynoglossus_semilaevis
WBGene00001225	eif-3.B	95	33.090	ENSCVAG00000015650	eif3bb	99	33.565	Cyprinodon_variegatus
WBGene00001225	eif-3.B	99	33.240	ENSDARG00000059654	eif3ba	98	33.240	Danio_rerio
WBGene00001225	eif-3.B	93	31.150	ENSDARG00000074213	eif3bb	99	32.910	Danio_rerio
WBGene00001225	eif-3.B	98	33.941	ENSDNOG00000049572	EIF3B	81	34.266	Dasypus_novemcinctus
WBGene00001225	eif-3.B	99	33.241	ENSDORG00000001401	Eif3b	85	33.241	Dipodomys_ordii
WBGene00001225	eif-3.B	97	33.001	FBgn0034237	eIF3b	96	33.381	Drosophila_melanogaster
WBGene00001225	eif-3.B	96	32.999	ENSETEG00000001719	EIF3B	99	32.948	Echinops_telfairi
WBGene00001225	eif-3.B	97	32.764	ENSEBUG00000004379	eif3bb	95	32.764	Eptatretus_burgeri
WBGene00001225	eif-3.B	98	33.941	ENSEASG00005021167	EIF3B	83	33.941	Equus_asinus_asinus
WBGene00001225	eif-3.B	98	33.941	ENSECAG00000013671	EIF3B	83	33.941	Equus_caballus
WBGene00001225	eif-3.B	79	38.983	ENSEEUG00000014359	EIF3B	82	38.983	Erinaceus_europaeus
WBGene00001225	eif-3.B	99	33.010	ENSELUG00000021762	eif3bb	98	33.010	Esox_lucius
WBGene00001225	eif-3.B	99	33.939	ENSFCAG00000005392	EIF3B	83	33.939	Felis_catus
WBGene00001225	eif-3.B	98	33.801	ENSFALG00000013907	EIF3B	93	33.894	Ficedula_albicollis
WBGene00001225	eif-3.B	98	34.081	ENSFDAG00000007558	EIF3B	86	34.081	Fukomys_damarensis
WBGene00001225	eif-3.B	91	33.082	ENSFHEG00000002563	eif3bb	97	33.474	Fundulus_heteroclitus
WBGene00001225	eif-3.B	98	32.727	ENSGMOG00000006100	eif3bb	98	32.727	Gadus_morhua
WBGene00001225	eif-3.B	98	34.034	ENSGALG00000040999	EIF3B	82	34.371	Gallus_gallus
WBGene00001225	eif-3.B	55	30.051	ENSGAFG00000004114	eif3bb	87	30.051	Gambusia_affinis
WBGene00001225	eif-3.B	91	32.530	ENSGACG00000016738	eif3bb	98	33.006	Gasterosteus_aculeatus
WBGene00001225	eif-3.B	97	34.037	ENSGAGG00000003659	EIF3B	83	34.177	Gopherus_agassizii
WBGene00001225	eif-3.B	71	33.973	ENSGGOG00000016291	EIF3B	73	33.973	Gorilla_gorilla
WBGene00001225	eif-3.B	95	31.924	ENSHBUG00000019329	eif3bb	99	32.730	Haplochromis_burtoni
WBGene00001225	eif-3.B	99	33.936	ENSHGLG00000015253	EIF3B	85	33.936	Heterocephalus_glaber_female
WBGene00001225	eif-3.B	99	33.936	ENSHGLG00100015005	EIF3B	85	34.222	Heterocephalus_glaber_male
WBGene00001225	eif-3.B	95	32.370	ENSHCOG00000020583	eif3bb	98	32.587	Hippocampus_comes
WBGene00001225	eif-3.B	99	33.752	ENSIPUG00000018347	eif3b	98	33.799	Ictalurus_punctatus
WBGene00001225	eif-3.B	99	33.936	ENSSTOG00000021545	EIF3B	93	33.936	Ictidomys_tridecemlineatus
WBGene00001225	eif-3.B	99	33.936	ENSJJAG00000014658	Eif3b	85	33.936	Jaculus_jaculus
WBGene00001225	eif-3.B	95	32.216	ENSKMAG00000007432	eif3bb	98	32.489	Kryptolebias_marmoratus
WBGene00001225	eif-3.B	95	32.899	ENSLBEG00000005233	eif3bb	99	33.287	Labrus_bergylta
WBGene00001225	eif-3.B	99	33.703	ENSLACG00000010357	EIF3B	99	33.703	Latimeria_chalumnae
WBGene00001225	eif-3.B	97	33.759	ENSLOCG00000004215	eif3bb	98	33.659	Lepisosteus_oculatus
WBGene00001225	eif-3.B	98	33.801	ENSLAFG00000001540	EIF3B	85	33.801	Loxodonta_africana
WBGene00001225	eif-3.B	98	34.081	ENSMFAG00000046100	EIF3B	86	34.081	Macaca_fascicularis
WBGene00001225	eif-3.B	98	33.659	ENSMMUG00000015529	EIF3B	82	33.659	Macaca_mulatta
WBGene00001225	eif-3.B	98	34.081	ENSMNEG00000042021	EIF3B	82	34.081	Macaca_nemestrina
WBGene00001225	eif-3.B	98	34.081	ENSMLEG00000042295	EIF3B	99	34.081	Mandrillus_leucophaeus
WBGene00001225	eif-3.B	97	33.569	ENSMAMG00000008654	eif3bb	99	33.519	Mastacembelus_armatus
WBGene00001225	eif-3.B	95	31.924	ENSMZEG00005011827	eif3bb	99	32.730	Maylandia_zebra
WBGene00001225	eif-3.B	96	33.285	ENSMGAG00000002719	EIF3B	97	33.333	Meleagris_gallopavo
WBGene00001225	eif-3.B	98	34.081	ENSMAUG00000020259	Eif3b	84	34.081	Mesocricetus_auratus
WBGene00001225	eif-3.B	98	34.222	ENSMICG00000010103	EIF3B	82	34.222	Microcebus_murinus
WBGene00001225	eif-3.B	98	34.222	ENSMOCG00000000390	Eif3b	84	34.222	Microtus_ochrogaster
WBGene00001225	eif-3.B	97	33.759	ENSMMOG00000003655	eif3bb	99	33.705	Mola_mola
WBGene00001225	eif-3.B	99	34.358	ENSMODG00000009778	EIF3B	80	34.358	Monodelphis_domestica
WBGene00001225	eif-3.B	97	31.250	ENSMALG00000002494	eif3bb	99	31.241	Monopterus_albus
WBGene00001225	eif-3.B	98	34.222	MGP_CAROLIEiJ_G0027948	Eif3b	100	39.205	Mus_caroli
WBGene00001225	eif-3.B	98	34.222	ENSMUSG00000056076	Eif3b	99	39.205	Mus_musculus
WBGene00001225	eif-3.B	98	34.222	MGP_PahariEiJ_G0024520	Eif3b	100	39.205	Mus_pahari
WBGene00001225	eif-3.B	98	34.222	MGP_SPRETEiJ_G0028952	Eif3b	100	39.205	Mus_spretus
WBGene00001225	eif-3.B	96	33.429	ENSMPUG00000017919	EIF3B	97	33.382	Mustela_putorius_furo
WBGene00001225	eif-3.B	98	34.502	ENSMLUG00000013740	EIF3B	98	34.502	Myotis_lucifugus
WBGene00001225	eif-3.B	99	33.936	ENSNGAG00000016188	Eif3b	85	33.936	Nannospalax_galili
WBGene00001225	eif-3.B	72	34.597	ENSNBRG00000008582	eif3bb	98	36.626	Neolamprologus_brichardi
WBGene00001225	eif-3.B	98	31.417	ENSNLEG00000008647	EIF3B	83	31.417	Nomascus_leucogenys
WBGene00001225	eif-3.B	75	35.094	ENSMEUG00000000880	EIF3B	70	35.094	Notamacropus_eugenii
WBGene00001225	eif-3.B	95	33.382	ENSOPRG00000014504	EIF3B	98	33.187	Ochotona_princeps
WBGene00001225	eif-3.B	99	32.684	ENSODEG00000012851	EIF3B	84	32.684	Octodon_degus
WBGene00001225	eif-3.B	95	32.216	ENSONIG00000003283	eif3bb	99	33.008	Oreochromis_niloticus
WBGene00001225	eif-3.B	88	33.699	ENSOANG00000004314	EIF3B	98	33.699	Ornithorhynchus_anatinus
WBGene00001225	eif-3.B	98	34.078	ENSOCUG00000010289	EIF3B	99	33.799	Oryctolagus_cuniculus
WBGene00001225	eif-3.B	96	33.050	ENSORLG00000008861	eif3bb	98	32.913	Oryzias_latipes
WBGene00001225	eif-3.B	96	33.050	ENSORLG00020012732	eif3bb	98	32.913	Oryzias_latipes_hni
WBGene00001225	eif-3.B	96	33.050	ENSORLG00015000357	eif3bb	98	32.913	Oryzias_latipes_hsok
WBGene00001225	eif-3.B	96	33.191	ENSOMEG00000017895	eif3bb	99	33.148	Oryzias_melastigma
WBGene00001225	eif-3.B	98	32.173	ENSOGAG00000006319	EIF3B	90	32.173	Otolemur_garnettii
WBGene00001225	eif-3.B	98	32.645	ENSOARG00000005137	EIF3B	95	32.645	Ovis_aries
WBGene00001225	eif-3.B	98	34.081	ENSPPAG00000032833	EIF3B	95	34.081	Pan_paniscus
WBGene00001225	eif-3.B	98	33.992	ENSPPRG00000003071	EIF3B	85	33.941	Panthera_pardus
WBGene00001225	eif-3.B	96	33.429	ENSPTIG00000013328	EIF3B	82	33.382	Panthera_tigris_altaica
WBGene00001225	eif-3.B	98	34.081	ENSPTRG00000018860	EIF3B	86	34.081	Pan_troglodytes
WBGene00001225	eif-3.B	98	34.081	ENSPTRG00000046041	-	86	34.081	Pan_troglodytes
WBGene00001225	eif-3.B	98	34.081	ENSPANG00000014557	EIF3B	86	34.081	Papio_anubis
WBGene00001225	eif-3.B	97	33.805	ENSPKIG00000009981	eif3ba	98	33.705	Paramormyrops_kingsleyae
WBGene00001225	eif-3.B	98	32.910	ENSPKIG00000011735	eif3bb	97	32.910	Paramormyrops_kingsleyae
WBGene00001225	eif-3.B	96	33.759	ENSPSIG00000009889	EIF3B	91	33.662	Pelodiscus_sinensis
WBGene00001225	eif-3.B	99	33.934	ENSPMGG00000016466	eif3bb	99	33.934	Periophthalmus_magnuspinnatus
WBGene00001225	eif-3.B	98	34.222	ENSPEMG00000021554	Eif3b	83	34.222	Peromyscus_maniculatus_bairdii
WBGene00001225	eif-3.B	91	32.980	ENSPMAG00000005331	eif3bb	95	32.980	Petromyzon_marinus
WBGene00001225	eif-3.B	96	33.429	ENSPCIG00000009464	EIF3B	97	33.237	Phascolarctos_cinereus
WBGene00001225	eif-3.B	91	32.931	ENSPFOG00000001449	eif3bb	99	33.287	Poecilia_formosa
WBGene00001225	eif-3.B	91	31.571	ENSPLAG00000005120	eif3bb	99	32.033	Poecilia_latipinna
WBGene00001225	eif-3.B	91	32.931	ENSPMEG00000015157	eif3bb	99	33.287	Poecilia_mexicana
WBGene00001225	eif-3.B	91	32.931	ENSPREG00000006422	eif3bb	99	33.287	Poecilia_reticulata
WBGene00001225	eif-3.B	98	33.898	ENSPPYG00000017313	EIF3B	76	33.898	Pongo_abelii
WBGene00001225	eif-3.B	58	38.298	ENSPCAG00000010455	-	65	38.298	Procavia_capensis
WBGene00001225	eif-3.B	98	34.222	ENSPCOG00000025894	EIF3B	82	34.222	Propithecus_coquereli
WBGene00001225	eif-3.B	96	33.094	ENSPVAG00000013735	EIF3B	92	33.043	Pteropus_vampyrus
WBGene00001225	eif-3.B	97	33.989	ENSPNAG00000021677	eif3ba	98	33.989	Pygocentrus_nattereri
WBGene00001225	eif-3.B	98	34.222	ENSRNOG00000001253	Eif3b	84	34.222	Rattus_norvegicus
WBGene00001225	eif-3.B	96	33.573	ENSRBIG00000030590	EIF3B	93	33.382	Rhinopithecus_bieti
WBGene00001225	eif-3.B	98	34.081	ENSRROG00000035023	EIF3B	86	34.081	Rhinopithecus_roxellana
WBGene00001225	eif-3.B	98	34.081	ENSSBOG00000001954	EIF3B	84	34.081	Saimiri_boliviensis_boliviensis
WBGene00001225	eif-3.B	99	33.939	ENSSHAG00000001063	EIF3B	81	33.939	Sarcophilus_harrisii
WBGene00001225	eif-3.B	99	34.218	ENSSFOG00015006390	eif3bb	98	34.218	Scleropages_formosus
WBGene00001225	eif-3.B	97	33.475	ENSSFOG00015005824	eif3ba	98	33.380	Scleropages_formosus
WBGene00001225	eif-3.B	95	32.216	ENSSMAG00000021264	eif3bb	98	32.630	Scophthalmus_maximus
WBGene00001225	eif-3.B	97	33.333	ENSSDUG00000016761	eif3bb	99	33.287	Seriola_dumerili
WBGene00001225	eif-3.B	95	32.507	ENSSLDG00000022874	eif3bb	99	33.148	Seriola_lalandi_dorsalis
WBGene00001225	eif-3.B	95	33.091	ENSSARG00000006036	EIF3B	98	32.895	Sorex_araneus
WBGene00001225	eif-3.B	95	32.855	ENSSPUG00000001870	EIF3B	96	33.284	Sphenodon_punctatus
WBGene00001225	eif-3.B	95	32.799	ENSSPAG00000013403	eif3bb	99	33.705	Stegastes_partitus
WBGene00001225	eif-3.B	98	34.081	ENSSSCG00000039390	EIF3B	85	34.081	Sus_scrofa
WBGene00001225	eif-3.B	98	33.659	ENSTGUG00000008140	EIF3B	100	33.659	Taeniopygia_guttata
WBGene00001225	eif-3.B	97	33.098	ENSTRUG00000011064	eif3bb	98	33.100	Takifugu_rubripes
WBGene00001225	eif-3.B	98	33.615	ENSTNIG00000004648	eif3bb	99	33.615	Tetraodon_nigroviridis
WBGene00001225	eif-3.B	98	30.423	ENSTTRG00000014713	EIF3B	78	30.423	Tursiops_truncatus
WBGene00001225	eif-3.B	98	33.427	ENSUAMG00000000800	EIF3B	99	33.475	Ursus_americanus
WBGene00001225	eif-3.B	98	33.427	ENSUMAG00000007200	EIF3B	100	33.628	Ursus_maritimus
WBGene00001225	eif-3.B	96	33.429	ENSVVUG00000004280	EIF3B	99	33.628	Vulpes_vulpes
WBGene00001225	eif-3.B	98	33.946	ENSXETG00000020593	eif3b	100	33.793	Xenopus_tropicalis
WBGene00001225	eif-3.B	95	32.319	ENSXCOG00000008279	eif3bb	99	32.591	Xiphophorus_couchianus
WBGene00001225	eif-3.B	95	32.319	ENSXMAG00000004705	eif3bb	99	32.591	Xiphophorus_maculatus