EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001226 (Gene tree)
Gene ID: -
Gene Symbol: eif-3.C
Alias: -
Full Name: Eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 3270 bases
Position: chrI:9976393-9979662
Accession: O02328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T23D8	eIF-3c_N	PF05470.12	9.7e-238	1	1
T23D8	eIF-3c_N	PF05470.12	9.7e-238	1	1
T23D8	eIF-3c_N	PF05470.12	9.7e-238	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T23D8.4.1	-	2883	NM_060237	T23D8.4.1	898 (aa)	NP_492638	O02328
T23D8.4.2	-	2897	NM_060237	T23D8.4.2	898 (aa)	NP_492638	O02328
T23D8.4.3	-	3044	NM_060237	T23D8.4.3	898 (aa)	NP_492638	O02328

Gene Model

Click here to download WBGene00001226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001226	eif-3.C	93	43.195	ENSG00000205609	EIF3CL	95	42.665	Homo_sapiens
WBGene00001226	eif-3.C	93	43.243	ENSG00000184110	EIF3C	95	50.649	Homo_sapiens
WBGene00001226	eif-3.C	79	47.863	ENSAPOG00000024092	eif3c	95	41.731	Acanthochromis_polyacanthus
WBGene00001226	eif-3.C	93	43.468	ENSAMEG00000015454	-	95	42.601	Ailuropoda_melanoleuca
WBGene00001226	eif-3.C	98	42.500	ENSACIG00000015082	eif3c	86	46.895	Amphilophus_citrinellus
WBGene00001226	eif-3.C	82	46.766	ENSAOCG00000021466	eif3c	99	41.640	Amphiprion_ocellaris
WBGene00001226	eif-3.C	66	45.746	ENSAPEG00000010521	eif3c	99	41.640	Amphiprion_percula
WBGene00001226	eif-3.C	67	46.044	ENSATEG00000019001	eif3c	100	42.211	Anabas_testudineus
WBGene00001226	eif-3.C	68	46.395	ENSACAG00000005937	-	96	43.382	Anolis_carolinensis
WBGene00001226	eif-3.C	93	43.243	ENSANAG00000020640	-	95	42.489	Aotus_nancymaae
WBGene00001226	eif-3.C	83	46.452	ENSACLG00000009347	eif3c	87	46.452	Astatotilapia_calliptera
WBGene00001226	eif-3.C	83	47.097	ENSACLG00000009322	eif3c	89	47.097	Astatotilapia_calliptera
WBGene00001226	eif-3.C	67	47.528	ENSAMXG00000020949	eif3c	99	42.600	Astyanax_mexicanus
WBGene00001226	eif-3.C	66	46.916	ENSBTAG00000006543	EIF3CL	95	42.536	Bos_taurus
WBGene00001226	eif-3.C	93	43.243	ENSCJAG00000006341	-	98	47.027	Callithrix_jacchus
WBGene00001226	eif-3.C	93	43.581	ENSCAFG00000017143	-	95	42.649	Canis_familiaris
WBGene00001226	eif-3.C	93	43.468	ENSCAFG00020017587	-	95	42.601	Canis_lupus_dingo
WBGene00001226	eif-3.C	66	46.916	ENSCHIG00000024795	-	95	42.679	Capra_hircus
WBGene00001226	eif-3.C	93	43.243	ENSTSYG00000003486	-	95	42.536	Carlito_syrichta
WBGene00001226	eif-3.C	93	38.558	ENSCAPG00000015887	-	99	38.688	Cavia_aperea
WBGene00001226	eif-3.C	93	42.793	ENSCPOG00000007533	-	95	42.601	Cavia_porcellus
WBGene00001226	eif-3.C	93	43.424	ENSCCAG00000034928	-	95	42.697	Cebus_capucinus
WBGene00001226	eif-3.C	94	36.723	ENSCCAG00000029099	-	91	37.470	Cebus_capucinus
WBGene00001226	eif-3.C	93	40.812	ENSCCAG00000027724	-	95	40.067	Cebus_capucinus
WBGene00001226	eif-3.C	93	43.243	ENSCATG00000032673	-	95	42.489	Cercocebus_atys
WBGene00001226	eif-3.C	93	43.131	ENSCLAG00000011094	-	95	42.377	Chinchilla_lanigera
WBGene00001226	eif-3.C	93	43.243	ENSCSAG00000006297	-	95	42.489	Chlorocebus_sabaeus
WBGene00001226	eif-3.C	71	44.101	ENSCPBG00000012407	-	88	44.294	Chrysemys_picta_bellii
WBGene00001226	eif-3.C	89	42.054	ENSCSAVG00000006744	-	99	41.932	Ciona_savignyi
WBGene00001226	eif-3.C	93	43.243	ENSCANG00000033626	-	95	42.489	Colobus_angolensis_palliatus
WBGene00001226	eif-3.C	66	46.753	ENSCGRG00001015265	EIF3C	99	42.734	Cricetulus_griseus_chok1gshd
WBGene00001226	eif-3.C	67	46.105	ENSCSEG00000017770	eif3c	99	42.418	Cynoglossus_semilaevis
WBGene00001226	eif-3.C	84	47.176	ENSCVAG00000005402	eif3c	95	42.841	Cyprinodon_variegatus
WBGene00001226	eif-3.C	98	41.737	ENSDARG00000016443	eif3c	99	41.834	Danio_rerio
WBGene00001226	eif-3.C	93	43.356	ENSDNOG00000031497	-	95	42.713	Dasypus_novemcinctus
WBGene00001226	eif-3.C	93	42.793	ENSDORG00000016471	Eif3c	95	42.601	Dipodomys_ordii
WBGene00001226	eif-3.C	64	45.254	FBgn0034258	eIF3c	96	41.996	Drosophila_melanogaster
WBGene00001226	eif-3.C	58	52.703	ENSETEG00000013527	-	87	52.915	Echinops_telfairi
WBGene00001226	eif-3.C	93	40.965	ENSEBUG00000001629	eif3c	96	40.355	Eptatretus_burgeri
WBGene00001226	eif-3.C	93	43.356	ENSECAG00000008746	-	95	42.489	Equus_caballus
WBGene00001226	eif-3.C	56	47.925	ENSEEUG00000006148	-	99	42.662	Erinaceus_europaeus
WBGene00001226	eif-3.C	60	31.071	ENSEEUG00000000726	-	60	32.321	Erinaceus_europaeus
WBGene00001226	eif-3.C	99	42.239	ENSELUG00000022257	eif3c	98	42.067	Esox_lucius
WBGene00001226	eif-3.C	93	43.356	ENSFCAG00000015782	-	95	43.161	Felis_catus
WBGene00001226	eif-3.C	93	42.793	ENSFDAG00000003588	-	95	42.727	Fukomys_damarensis
WBGene00001226	eif-3.C	97	42.812	ENSFHEG00000014154	EIF3C	99	42.781	Fundulus_heteroclitus
WBGene00001226	eif-3.C	61	47.986	ENSGMOG00000016885	eif3c	99	43.017	Gadus_morhua
WBGene00001226	eif-3.C	62	47.314	ENSGACG00000007652	eif3c	95	42.905	Gasterosteus_aculeatus
WBGene00001226	eif-3.C	67	45.746	ENSGAGG00000006666	-	99	42.007	Gopherus_agassizii
WBGene00001226	eif-3.C	93	43.243	ENSGGOG00000026919	EIF3C	99	42.489	Gorilla_gorilla
WBGene00001226	eif-3.C	59	33.577	ENSGGOG00000022677	-	99	33.942	Gorilla_gorilla
WBGene00001226	eif-3.C	93	43.468	ENSHGLG00000011445	EIF3C	95	42.713	Heterocephalus_glaber_female
WBGene00001226	eif-3.C	93	43.468	ENSHGLG00100000217	EIF3C	95	42.713	Heterocephalus_glaber_male
WBGene00001226	eif-3.C	67	45.728	ENSHCOG00000019694	eif3c	96	42.574	Hippocampus_comes
WBGene00001226	eif-3.C	68	46.519	ENSIPUG00000016878	eif3c	99	42.044	Ictalurus_punctatus
WBGene00001226	eif-3.C	93	43.243	ENSSTOG00000021278	-	95	42.713	Ictidomys_tridecemlineatus
WBGene00001226	eif-3.C	93	42.954	ENSJJAG00000012722	Eif3c	95	42.649	Jaculus_jaculus
WBGene00001226	eif-3.C	97	42.888	ENSKMAG00000021662	eif3c	99	41.614	Kryptolebias_marmoratus
WBGene00001226	eif-3.C	94	41.829	ENSLBEG00000023370	eif3c	100	42.222	Labrus_bergylta
WBGene00001226	eif-3.C	62	48.110	ENSLACG00000000770	eif3c	100	42.782	Latimeria_chalumnae
WBGene00001226	eif-3.C	93	43.356	ENSLAFG00000027426	-	95	42.649	Loxodonta_africana
WBGene00001226	eif-3.C	93	43.243	ENSMFAG00000041930	-	95	42.489	Macaca_fascicularis
WBGene00001226	eif-3.C	93	43.243	ENSMMUG00000011798	-	95	42.489	Macaca_mulatta
WBGene00001226	eif-3.C	93	43.243	ENSMNEG00000023915	-	95	42.489	Macaca_nemestrina
WBGene00001226	eif-3.C	93	43.243	ENSMLEG00000027529	-	95	42.489	Mandrillus_leucophaeus
WBGene00001226	eif-3.C	83	46.166	ENSMAMG00000012512	eif3c	100	41.728	Mastacembelus_armatus
WBGene00001226	eif-3.C	83	46.452	ENSMZEG00005013699	eif3c	87	46.452	Maylandia_zebra
WBGene00001226	eif-3.C	83	47.097	ENSMZEG00005013685	eif3c	89	47.097	Maylandia_zebra
WBGene00001226	eif-3.C	66	46.753	ENSMAUG00000010621	Eif3c	99	42.457	Mesocricetus_auratus
WBGene00001226	eif-3.C	93	43.468	ENSMICG00000036748	-	95	42.777	Microcebus_murinus
WBGene00001226	eif-3.C	66	46.753	ENSMOCG00000004204	Eif3c	93	42.365	Microtus_ochrogaster
WBGene00001226	eif-3.C	69	45.512	ENSMMOG00000001572	eif3c	72	46.104	Mola_mola
WBGene00001226	eif-3.C	93	42.295	ENSMODG00000015579	-	95	41.957	Monodelphis_domestica
WBGene00001226	eif-3.C	84	45.907	ENSMALG00000008907	eif3c	100	41.721	Monopterus_albus
WBGene00001226	eif-3.C	97	42.519	MGP_CAROLIEiJ_G0030451	Eif3c	99	42.026	Mus_caroli
WBGene00001226	eif-3.C	97	42.626	ENSMUSG00000030738	Eif3c	99	42.134	Mus_musculus
WBGene00001226	eif-3.C	66	46.104	MGP_PahariEiJ_G0013661	Eif3c	99	42.134	Mus_pahari
WBGene00001226	eif-3.C	97	42.519	MGP_SPRETEiJ_G0031565	Eif3c	99	42.457	Mus_spretus
WBGene00001226	eif-3.C	93	43.468	ENSMPUG00000012732	-	99	42.601	Mustela_putorius_furo
WBGene00001226	eif-3.C	93	42.665	ENSMLUG00000015558	-	95	42.809	Myotis_lucifugus
WBGene00001226	eif-3.C	66	46.753	ENSNGAG00000007177	-	99	42.473	Nannospalax_galili
WBGene00001226	eif-3.C	62	38.850	ENSNGAG00000010901	-	88	36.016	Nannospalax_galili
WBGene00001226	eif-3.C	93	41.404	ENSNLEG00000001425	-	94	40.936	Nomascus_leucogenys
WBGene00001226	eif-3.C	66	40.843	ENSMEUG00000009939	-	95	37.838	Notamacropus_eugenii
WBGene00001226	eif-3.C	66	46.591	ENSOPRG00000000931	-	95	42.377	Ochotona_princeps
WBGene00001226	eif-3.C	66	46.753	ENSODEG00000013508	-	95	42.601	Octodon_degus
WBGene00001226	eif-3.C	66	33.977	ENSONIG00000011434	eif3c	98	33.977	Oreochromis_niloticus
WBGene00001226	eif-3.C	65	45.499	ENSOANG00000011410	-	95	41.583	Ornithorhynchus_anatinus
WBGene00001226	eif-3.C	93	43.356	ENSOCUG00000022489	-	95	42.825	Oryctolagus_cuniculus
WBGene00001226	eif-3.C	63	47.099	ENSORLG00000006318	eif3c	95	42.111	Oryzias_latipes
WBGene00001226	eif-3.C	73	48.718	ENSORLG00020015713	eif3c	95	41.932	Oryzias_latipes_hni
WBGene00001226	eif-3.C	63	46.399	ENSORLG00015013772	eif3c	95	42.794	Oryzias_latipes_hsok
WBGene00001226	eif-3.C	66	46.302	ENSOMEG00000020450	eif3c	95	42.809	Oryzias_melastigma
WBGene00001226	eif-3.C	93	43.243	ENSOGAG00000012737	-	95	42.761	Otolemur_garnettii
WBGene00001226	eif-3.C	66	46.916	ENSOARG00000002892	-	95	42.649	Ovis_aries
WBGene00001226	eif-3.C	93	43.356	ENSPPRG00000012336	-	95	43.161	Panthera_pardus
WBGene00001226	eif-3.C	93	43.356	ENSPTIG00000011712	-	95	43.161	Panthera_tigris_altaica
WBGene00001226	eif-3.C	93	43.243	ENSPANG00000021151	-	95	42.489	Papio_anubis
WBGene00001226	eif-3.C	99	42.011	ENSPKIG00000002049	eif3c	99	42.144	Paramormyrops_kingsleyae
WBGene00001226	eif-3.C	64	47.176	ENSPMGG00000005409	eif3c	68	47.176	Periophthalmus_magnuspinnatus
WBGene00001226	eif-3.C	93	43.715	ENSPEMG00000010899	Eif3c	95	42.841	Peromyscus_maniculatus_bairdii
WBGene00001226	eif-3.C	65	46.700	ENSPCIG00000025206	-	95	42.165	Phascolarctos_cinereus
WBGene00001226	eif-3.C	97	42.476	ENSPFOG00000004476	eif3c	99	42.796	Poecilia_formosa
WBGene00001226	eif-3.C	89	42.160	ENSPLAG00000017480	eif3c	99	43.039	Poecilia_latipinna
WBGene00001226	eif-3.C	97	42.415	ENSPMEG00000019512	eif3c	99	42.689	Poecilia_mexicana
WBGene00001226	eif-3.C	97	43.207	ENSPREG00000023139	eif3c	99	42.570	Poecilia_reticulata
WBGene00001226	eif-3.C	93	42.230	ENSPPYG00000007227	-	95	41.751	Pongo_abelii
WBGene00001226	eif-3.C	64	47.010	ENSPCAG00000012710	-	98	47.010	Procavia_capensis
WBGene00001226	eif-3.C	93	43.356	ENSPCOG00000019289	-	95	42.601	Propithecus_coquereli
WBGene00001226	eif-3.C	93	43.018	ENSPVAG00000005804	-	95	42.265	Pteropus_vampyrus
WBGene00001226	eif-3.C	99	41.888	ENSPNAG00000024040	eif3c	99	43.131	Pygocentrus_nattereri
WBGene00001226	eif-3.C	66	46.591	ENSRNOG00000018761	Eif3c	99	42.134	Rattus_norvegicus
WBGene00001226	eif-3.C	89	43.845	ENSRBIG00000044009	-	93	42.558	Rhinopithecus_bieti
WBGene00001226	eif-3.C	93	43.243	ENSRROG00000043626	-	95	42.489	Rhinopithecus_roxellana
WBGene00001226	eif-3.C	93	43.243	ENSSBOG00000032155	-	95	42.377	Saimiri_boliviensis_boliviensis
WBGene00001226	eif-3.C	66	46.204	ENSSHAG00000011808	-	99	42.088	Sarcophilus_harrisii
WBGene00001226	eif-3.C	98	42.857	ENSSFOG00015021823	eif3c	96	42.715	Scleropages_formosus
WBGene00001226	eif-3.C	65	46.016	ENSSMAG00000016638	eif3c	97	42.464	Scophthalmus_maximus
WBGene00001226	eif-3.C	66	46.656	ENSSDUG00000023117	eif3c	99	42.004	Seriola_dumerili
WBGene00001226	eif-3.C	83	46.493	ENSSLDG00000009706	eif3c	99	41.898	Seriola_lalandi_dorsalis
WBGene00001226	eif-3.C	93	43.771	ENSSPUG00000016470	-	99	44.092	Sphenodon_punctatus
WBGene00001226	eif-3.C	68	45.800	ENSSPAG00000000426	eif3c	99	42.196	Stegastes_partitus
WBGene00001226	eif-3.C	66	46.916	ENSSSCG00000034927	-	95	42.489	Sus_scrofa
WBGene00001226	eif-3.C	68	44.168	ENSTRUG00000008951	eif3c	99	40.961	Takifugu_rubripes
WBGene00001226	eif-3.C	97	41.603	ENSTNIG00000015210	eif3c	99	41.866	Tetraodon_nigroviridis
WBGene00001226	eif-3.C	93	43.581	ENSTTRG00000005880	-	95	42.937	Tursiops_truncatus
WBGene00001226	eif-3.C	66	46.916	ENSUAMG00000001127	-	98	54.839	Ursus_americanus
WBGene00001226	eif-3.C	93	43.468	ENSUMAG00000010927	-	95	42.601	Ursus_maritimus
WBGene00001226	eif-3.C	93	42.342	ENSVVUG00000025970	-	95	41.732	Vulpes_vulpes
WBGene00001226	eif-3.C	97	41.836	ENSXETG00000002941	eif3c	99	43.636	Xenopus_tropicalis
WBGene00001226	eif-3.C	97	42.489	ENSXMAG00000013796	eif3c	99	42.719	Xiphophorus_maculatus