EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001227 (Gene tree)
Gene ID: -
Gene Symbol: eif-3.D
Alias: -
Full Name: Eukaryotic translation initiation factor 3 subunit D
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 1941 bases
Position: chrIII:8969638-8971578
Accession: P30642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R08D7	eIF-3_zeta	PF05091.12	5.3e-181	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R08D7.3	-	1806	NM_066583	R08D7.3	570 (aa)	NP_498984	P30642

Gene Model

Click here to download WBGene00001227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001227	eif-3.D	97	45.063	ENSG00000100353	EIF3D	96	44.704	Homo_sapiens
WBGene00001227	eif-3.D	97	44.544	ENSAPOG00000002054	eif3d	98	44.056	Acanthochromis_polyacanthus
WBGene00001227	eif-3.D	97	45.242	ENSAMEG00000009639	EIF3D	96	44.704	Ailuropoda_melanoleuca
WBGene00001227	eif-3.D	97	44.920	ENSACIG00000013847	eif3d	97	44.425	Amphilophus_citrinellus
WBGene00001227	eif-3.D	97	44.544	ENSAOCG00000022455	eif3d	99	44.056	Amphiprion_ocellaris
WBGene00001227	eif-3.D	53	39.542	ENSAOCG00000005916	-	94	39.016	Amphiprion_ocellaris
WBGene00001227	eif-3.D	97	44.544	ENSAPEG00000020361	eif3d	99	44.056	Amphiprion_percula
WBGene00001227	eif-3.D	97	44.723	ENSATEG00000020784	eif3d	99	44.231	Anabas_testudineus
WBGene00001227	eif-3.D	97	39.750	ENSAPLG00000002632	EIF3D	99	39.677	Anas_platyrhynchos
WBGene00001227	eif-3.D	97	45.063	ENSACAG00000016308	EIF3D	96	44.524	Anolis_carolinensis
WBGene00001227	eif-3.D	97	45.063	ENSANAG00000026835	EIF3D	96	44.704	Aotus_nancymaae
WBGene00001227	eif-3.D	97	44.742	ENSACLG00000021167	eif3d	96	44.444	Astatotilapia_calliptera
WBGene00001227	eif-3.D	74	47.765	ENSACLG00000021712	eif3d	72	50.130	Astatotilapia_calliptera
WBGene00001227	eif-3.D	74	47.406	ENSACLG00000021768	EIF3D	75	50.130	Astatotilapia_calliptera
WBGene00001227	eif-3.D	74	47.406	ENSACLG00000021852	eif3d	75	50.130	Astatotilapia_calliptera
WBGene00001227	eif-3.D	74	47.406	ENSACLG00000021430	EIF3D	82	50.130	Astatotilapia_calliptera
WBGene00001227	eif-3.D	97	45.081	ENSAMXG00000017547	eif3d	99	44.658	Astyanax_mexicanus
WBGene00001227	eif-3.D	97	45.242	ENSBTAG00000001988	EIF3D	96	44.704	Bos_taurus
WBGene00001227	eif-3.D	97	45.063	ENSCJAG00000013831	EIF3D	92	56.983	Callithrix_jacchus
WBGene00001227	eif-3.D	97	45.242	ENSCAFG00000001544	EIF3D	96	44.704	Canis_familiaris
WBGene00001227	eif-3.D	97	45.242	ENSCAFG00020004483	EIF3D	96	44.704	Canis_lupus_dingo
WBGene00001227	eif-3.D	97	45.242	ENSCHIG00000012106	EIF3D	96	44.704	Capra_hircus
WBGene00001227	eif-3.D	97	45.063	ENSTSYG00000008540	EIF3D	92	56.983	Carlito_syrichta
WBGene00001227	eif-3.D	97	44.704	ENSCAPG00000015164	EIF3D	94	44.165	Cavia_aperea
WBGene00001227	eif-3.D	97	45.242	ENSCPOG00000002529	EIF3D	96	44.704	Cavia_porcellus
WBGene00001227	eif-3.D	97	45.063	ENSCCAG00000027331	EIF3D	96	44.704	Cebus_capucinus
WBGene00001227	eif-3.D	97	45.063	ENSCATG00000045003	EIF3D	93	52.074	Cercocebus_atys
WBGene00001227	eif-3.D	97	45.242	ENSCLAG00000016545	EIF3D	97	44.704	Chinchilla_lanigera
WBGene00001227	eif-3.D	97	45.063	ENSCSAG00000007898	EIF3D	97	44.704	Chlorocebus_sabaeus
WBGene00001227	eif-3.D	97	44.144	ENSCHOG00000004811	EIF3D	96	43.784	Choloepus_hoffmanni
WBGene00001227	eif-3.D	97	45.242	ENSCPBG00000016309	EIF3D	97	44.704	Chrysemys_picta_bellii
WBGene00001227	eif-3.D	96	46.182	ENSCING00000003680	-	95	46.000	Ciona_intestinalis
WBGene00001227	eif-3.D	99	44.692	ENSCSAVG00000001450	-	95	45.063	Ciona_savignyi
WBGene00001227	eif-3.D	97	45.063	ENSCANG00000031179	EIF3D	85	56.983	Colobus_angolensis_palliatus
WBGene00001227	eif-3.D	97	45.422	ENSCGRG00001016584	EIF3D	96	44.883	Cricetulus_griseus_chok1gshd
WBGene00001227	eif-3.D	97	45.422	ENSCGRG00000000302	EIF3D	96	44.883	Cricetulus_griseus_crigri
WBGene00001227	eif-3.D	97	44.723	ENSCSEG00000020548	eif3d	96	44.424	Cynoglossus_semilaevis
WBGene00001227	eif-3.D	67	50.518	ENSCVAG00000001999	eif3d	85	49.750	Cyprinodon_variegatus
WBGene00001227	eif-3.D	97	44.365	ENSDARG00000021257	eif3d	96	44.424	Danio_rerio
WBGene00001227	eif-3.D	53	40.328	ENSDNOG00000018482	EIF3D	92	39.414	Dasypus_novemcinctus
WBGene00001227	eif-3.D	97	45.422	ENSDORG00000010491	Eif3d	96	44.883	Dipodomys_ordii
WBGene00001227	eif-3.D	97	44.982	FBgn0040227	eIF3d1	94	44.065	Drosophila_melanogaster
WBGene00001227	eif-3.D	98	42.908	FBgn0037994	eIF3d2	94	41.410	Drosophila_melanogaster
WBGene00001227	eif-3.D	66	46.316	ENSETEG00000009404	-	79	46.296	Echinops_telfairi
WBGene00001227	eif-3.D	94	38.306	ENSETEG00000002070	-	98	37.798	Echinops_telfairi
WBGene00001227	eif-3.D	67	44.271	ENSETEG00000016315	-	81	45.040	Echinops_telfairi
WBGene00001227	eif-3.D	87	45.200	ENSEBUG00000009405	eif3d	93	44.112	Eptatretus_burgeri
WBGene00001227	eif-3.D	97	45.242	ENSEASG00005018906	EIF3D	96	44.704	Equus_asinus_asinus
WBGene00001227	eif-3.D	97	45.242	ENSECAG00000022413	EIF3D	96	44.704	Equus_caballus
WBGene00001227	eif-3.D	97	41.113	ENSEEUG00000015771	EIF3D	96	40.794	Erinaceus_europaeus
WBGene00001227	eif-3.D	97	44.902	ENSELUG00000018698	eif3d	96	44.604	Esox_lucius
WBGene00001227	eif-3.D	97	45.242	ENSFCAG00000001131	EIF3D	96	44.704	Felis_catus
WBGene00001227	eif-3.D	97	44.821	ENSFALG00000013012	EIF3D	96	44.704	Ficedula_albicollis
WBGene00001227	eif-3.D	97	45.422	ENSFDAG00000004352	EIF3D	96	44.883	Fukomys_damarensis
WBGene00001227	eif-3.D	97	43.137	ENSGMOG00000013341	eif3d	97	43.011	Gadus_morhua
WBGene00001227	eif-3.D	97	44.821	ENSGALG00000012529	EIF3D	96	44.704	Gallus_gallus
WBGene00001227	eif-3.D	98	44.248	ENSGACG00000014538	eif3d	98	43.805	Gasterosteus_aculeatus
WBGene00001227	eif-3.D	97	45.242	ENSGAGG00000009617	EIF3D	96	44.704	Gopherus_agassizii
WBGene00001227	eif-3.D	97	45.063	ENSGGOG00000003428	EIF3D	96	44.704	Gorilla_gorilla
WBGene00001227	eif-3.D	97	44.742	ENSHBUG00000017230	eif3d	98	44.015	Haplochromis_burtoni
WBGene00001227	eif-3.D	97	37.658	ENSHGLG00000006449	-	98	37.794	Heterocephalus_glaber_female
WBGene00001227	eif-3.D	97	45.242	ENSHGLG00000016422	-	96	44.704	Heterocephalus_glaber_female
WBGene00001227	eif-3.D	97	34.532	ENSHGLG00000000135	-	95	34.353	Heterocephalus_glaber_female
WBGene00001227	eif-3.D	97	45.242	ENSHGLG00100007477	-	96	44.704	Heterocephalus_glaber_male
WBGene00001227	eif-3.D	97	37.365	ENSHGLG00100001321	-	96	37.184	Heterocephalus_glaber_male
WBGene00001227	eif-3.D	96	37.843	ENSHGLG00100013710	-	96	37.982	Heterocephalus_glaber_male
WBGene00001227	eif-3.D	97	44.544	ENSHCOG00000007799	eif3d	96	44.424	Hippocampus_comes
WBGene00001227	eif-3.D	97	45.081	ENSIPUG00000017267	eif3d	96	45.324	Ictalurus_punctatus
WBGene00001227	eif-3.D	97	45.242	ENSSTOG00000011335	EIF3D	96	44.704	Ictidomys_tridecemlineatus
WBGene00001227	eif-3.D	97	45.341	ENSJJAG00000010854	Eif3d	96	44.964	Jaculus_jaculus
WBGene00001227	eif-3.D	97	44.742	ENSKMAG00000007133	eif3d	96	44.624	Kryptolebias_marmoratus
WBGene00001227	eif-3.D	97	45.098	ENSLBEG00000005296	eif3d	99	44.599	Labrus_bergylta
WBGene00001227	eif-3.D	97	45.161	ENSLACG00000001606	EIF3D	97	45.088	Latimeria_chalumnae
WBGene00001227	eif-3.D	99	45.184	ENSLAFG00000001714	EIF3D	96	45.063	Loxodonta_africana
WBGene00001227	eif-3.D	97	45.063	ENSMFAG00000000481	EIF3D	92	56.983	Macaca_fascicularis
WBGene00001227	eif-3.D	97	45.063	ENSMMUG00000012754	EIF3D	95	49.789	Macaca_mulatta
WBGene00001227	eif-3.D	97	45.063	ENSMNEG00000012843	EIF3D	92	56.983	Macaca_nemestrina
WBGene00001227	eif-3.D	97	45.063	ENSMLEG00000037251	EIF3D	92	56.983	Mandrillus_leucophaeus
WBGene00001227	eif-3.D	97	44.365	ENSMAMG00000020219	eif3d	99	43.881	Mastacembelus_armatus
WBGene00001227	eif-3.D	97	44.742	ENSMZEG00005023294	eif3d	96	44.624	Maylandia_zebra
WBGene00001227	eif-3.D	97	43.929	ENSMZEG00005024006	eif3d	96	43.806	Maylandia_zebra
WBGene00001227	eif-3.D	56	40.252	ENSMGAG00000012653	EIF3D	100	39.688	Meleagris_gallopavo
WBGene00001227	eif-3.D	97	45.422	ENSMAUG00000013161	Eif3d	96	44.883	Mesocricetus_auratus
WBGene00001227	eif-3.D	97	45.242	ENSMICG00000012161	EIF3D	92	56.983	Microcebus_murinus
WBGene00001227	eif-3.D	97	45.422	ENSMOCG00000011605	Eif3d	96	44.883	Microtus_ochrogaster
WBGene00001227	eif-3.D	97	44.186	ENSMMOG00000021496	eif3d	99	43.706	Mola_mola
WBGene00001227	eif-3.D	97	45.422	ENSMODG00000000821	EIF3D	96	44.883	Monodelphis_domestica
WBGene00001227	eif-3.D	97	44.723	ENSMALG00000019436	eif3d	99	44.231	Monopterus_albus
WBGene00001227	eif-3.D	97	45.422	MGP_CAROLIEiJ_G0019973	Eif3d	96	44.883	Mus_caroli
WBGene00001227	eif-3.D	97	45.422	ENSMUSG00000016554	Eif3d	96	44.883	Mus_musculus
WBGene00001227	eif-3.D	97	45.422	MGP_PahariEiJ_G0019975	Eif3d	96	44.883	Mus_pahari
WBGene00001227	eif-3.D	97	45.422	MGP_SPRETEiJ_G0020871	Eif3d	96	44.883	Mus_spretus
WBGene00001227	eif-3.D	97	45.242	ENSMLUG00000015857	EIF3D	96	44.704	Myotis_lucifugus
WBGene00001227	eif-3.D	97	45.242	ENSNGAG00000012038	Eif3d	96	44.704	Nannospalax_galili
WBGene00001227	eif-3.D	97	45.063	ENSNLEG00000014560	EIF3D	92	56.983	Nomascus_leucogenys
WBGene00001227	eif-3.D	97	45.422	ENSMEUG00000004561	EIF3D	97	45.063	Notamacropus_eugenii
WBGene00001227	eif-3.D	86	44.422	ENSOPRG00000006924	EIF3D	96	43.813	Ochotona_princeps
WBGene00001227	eif-3.D	97	45.242	ENSODEG00000011039	EIF3D	96	44.704	Octodon_degus
WBGene00001227	eif-3.D	97	44.742	ENSONIG00000009713	eif3d	96	44.444	Oreochromis_niloticus
WBGene00001227	eif-3.D	97	38.801	ENSOANG00000007483	EIF3D	99	38.516	Ornithorhynchus_anatinus
WBGene00001227	eif-3.D	97	45.242	ENSOCUG00000006363	EIF3D	96	44.704	Oryctolagus_cuniculus
WBGene00001227	eif-3.D	97	44.365	ENSORLG00000001449	eif3d	90	54.450	Oryzias_latipes
WBGene00001227	eif-3.D	53	38.689	ENSORLG00020013943	eif3d	96	38.361	Oryzias_latipes_hni
WBGene00001227	eif-3.D	97	44.544	ENSORLG00020000383	eif3d	98	44.056	Oryzias_latipes_hni
WBGene00001227	eif-3.D	53	38.689	ENSORLG00015006954	eif3d	95	38.033	Oryzias_latipes_hsok
WBGene00001227	eif-3.D	53	39.016	ENSORLG00015006930	eif3d	90	38.361	Oryzias_latipes_hsok
WBGene00001227	eif-3.D	53	38.689	ENSOMEG00000017372	eif3d	95	38.033	Oryzias_melastigma
WBGene00001227	eif-3.D	53	39.414	ENSOMEG00000017337	eif3d	95	38.033	Oryzias_melastigma
WBGene00001227	eif-3.D	97	44.784	ENSOGAG00000002978	EIF3D	96	44.245	Otolemur_garnettii
WBGene00001227	eif-3.D	97	45.242	ENSOARG00000018926	EIF3D	96	44.704	Ovis_aries
WBGene00001227	eif-3.D	97	45.063	ENSPPAG00000031183	EIF3D	96	44.704	Pan_paniscus
WBGene00001227	eif-3.D	97	45.242	ENSPPRG00000007244	EIF3D	96	44.704	Panthera_pardus
WBGene00001227	eif-3.D	97	44.345	ENSPTIG00000012272	EIF3D	96	43.806	Panthera_tigris_altaica
WBGene00001227	eif-3.D	97	45.063	ENSPTRG00000014313	EIF3D	96	44.704	Pan_troglodytes
WBGene00001227	eif-3.D	97	45.063	ENSPANG00000023980	EIF3D	93	52.074	Papio_anubis
WBGene00001227	eif-3.D	97	44.742	ENSPKIG00000013892	eif3d	99	44.077	Paramormyrops_kingsleyae
WBGene00001227	eif-3.D	97	45.422	ENSPSIG00000010983	EIF3D	96	44.883	Pelodiscus_sinensis
WBGene00001227	eif-3.D	96	42.441	ENSPMGG00000004524	eif3d	99	42.259	Periophthalmus_magnuspinnatus
WBGene00001227	eif-3.D	97	45.422	ENSPEMG00000014069	Eif3d	96	44.883	Peromyscus_maniculatus_bairdii
WBGene00001227	eif-3.D	52	40.333	ENSPMAG00000008165	eif3d	94	40.667	Petromyzon_marinus
WBGene00001227	eif-3.D	97	45.422	ENSPCIG00000021563	EIF3D	96	44.883	Phascolarctos_cinereus
WBGene00001227	eif-3.D	97	44.723	ENSPFOG00000007516	eif3d	99	44.406	Poecilia_formosa
WBGene00001227	eif-3.D	97	44.723	ENSPLAG00000015253	eif3d	99	44.406	Poecilia_latipinna
WBGene00001227	eif-3.D	97	44.902	ENSPMEG00000019987	eif3d	99	44.580	Poecilia_mexicana
WBGene00001227	eif-3.D	97	40.143	ENSPPYG00000011774	EIF3D	97	39.785	Pongo_abelii
WBGene00001227	eif-3.D	84	62.992	ENSPCAG00000007788	EIF3D	83	63.200	Procavia_capensis
WBGene00001227	eif-3.D	97	44.345	ENSPCOG00000014552	EIF3D	96	44.324	Propithecus_coquereli
WBGene00001227	eif-3.D	97	45.422	ENSPVAG00000002014	EIF3D	96	44.883	Pteropus_vampyrus
WBGene00001227	eif-3.D	97	44.563	ENSPNYG00000011917	eif3d	96	44.444	Pundamilia_nyererei
WBGene00001227	eif-3.D	97	45.276	ENSPNAG00000000176	eif3d	96	45.341	Pygocentrus_nattereri
WBGene00001227	eif-3.D	97	45.422	ENSRNOG00000005804	Eif3d	96	44.883	Rattus_norvegicus
WBGene00001227	eif-3.D	97	45.063	ENSRBIG00000041563	EIF3D	92	56.983	Rhinopithecus_bieti
WBGene00001227	eif-3.D	97	45.063	ENSRROG00000039588	EIF3D	92	56.983	Rhinopithecus_roxellana
WBGene00001227	eif-3.D	97	45.063	ENSSBOG00000032811	EIF3D	96	44.704	Saimiri_boliviensis_boliviensis
WBGene00001227	eif-3.D	97	45.422	ENSSHAG00000011209	EIF3D	96	44.883	Sarcophilus_harrisii
WBGene00001227	eif-3.D	97	44.563	ENSSFOG00015023800	eif3d	99	44.425	Scleropages_formosus
WBGene00001227	eif-3.D	97	45.081	ENSSMAG00000013962	eif3d	98	51.282	Scophthalmus_maximus
WBGene00001227	eif-3.D	97	44.563	ENSSDUG00000023224	eif3d	99	44.077	Seriola_dumerili
WBGene00001227	eif-3.D	97	44.563	ENSSLDG00000006833	eif3d	99	44.077	Seriola_lalandi_dorsalis
WBGene00001227	eif-3.D	86	42.683	ENSSARG00000012488	EIF3D	76	49.740	Sorex_araneus
WBGene00001227	eif-3.D	97	44.704	ENSSPUG00000011683	EIF3D	96	44.165	Sphenodon_punctatus
WBGene00001227	eif-3.D	97	44.742	ENSSPAG00000003591	eif3d	99	44.425	Stegastes_partitus
WBGene00001227	eif-3.D	97	45.242	ENSSSCG00000000141	EIF3D	96	44.704	Sus_scrofa
WBGene00001227	eif-3.D	97	44.643	ENSTGUG00000010728	EIF3D	96	44.524	Taeniopygia_guttata
WBGene00001227	eif-3.D	97	44.544	ENSTRUG00000007886	eif3d	96	44.604	Takifugu_rubripes
WBGene00001227	eif-3.D	99	43.979	ENSTNIG00000011263	eif3d	96	45.076	Tetraodon_nigroviridis
WBGene00001227	eif-3.D	90	45.331	ENSTBEG00000006268	EIF3D	96	45.243	Tupaia_belangeri
WBGene00001227	eif-3.D	97	44.704	ENSTTRG00000006637	EIF3D	96	44.144	Tursiops_truncatus
WBGene00001227	eif-3.D	97	45.242	ENSUAMG00000017485	EIF3D	97	44.704	Ursus_americanus
WBGene00001227	eif-3.D	97	45.242	ENSUMAG00000015827	EIF3D	96	44.704	Ursus_maritimus
WBGene00001227	eif-3.D	52	37.919	ENSVPAG00000000359	-	98	37.000	Vicugna_pacos
WBGene00001227	eif-3.D	97	45.242	ENSVVUG00000023578	EIF3D	96	44.704	Vulpes_vulpes
WBGene00001227	eif-3.D	97	44.464	ENSXETG00000027259	eif3d	96	44.345	Xenopus_tropicalis
WBGene00001227	eif-3.D	97	42.883	ENSXCOG00000011633	eif3d	99	42.586	Xiphophorus_couchianus
WBGene00001227	eif-3.D	97	44.723	ENSXMAG00000000954	eif3d	99	44.406	Xiphophorus_maculatus