EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001259 (Gene tree)
Gene ID: -
Gene Symbol: emb-5
Alias: -
Full Name: Suppressor of Ty 6 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 5378 bases
Position: chrIII:4715293-4720670
Accession: P34703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T04A8	S1	PF00575.23	8.3e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T04A8.14	-	4865	NM_065568	T04A8.14	1521 (aa)	NP_497969	P34703

Gene Model

Click here to download WBGene00001259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001259	emb-5	87	38.210	ENSG00000109111	SUPT6H	78	38.792	Homo_sapiens
WBGene00001259	emb-5	83	38.690	ENSAPOG00000019366	supt6h	80	38.739	Acanthochromis_polyacanthus
WBGene00001259	emb-5	87	38.366	ENSAMEG00000004744	SUPT6H	78	38.719	Ailuropoda_melanoleuca
WBGene00001259	emb-5	83	37.997	ENSACIG00000004887	supt6h	82	38.165	Amphilophus_citrinellus
WBGene00001259	emb-5	83	38.052	ENSAOCG00000007013	supt6h	81	37.428	Amphiprion_ocellaris
WBGene00001259	emb-5	83	38.052	ENSAPEG00000018434	supt6h	81	37.428	Amphiprion_percula
WBGene00001259	emb-5	83	37.681	ENSATEG00000006950	supt6h	82	37.282	Anabas_testudineus
WBGene00001259	emb-5	87	38.395	ENSAPLG00000001319	SUPT6H	79	38.511	Anas_platyrhynchos
WBGene00001259	emb-5	87	38.439	ENSANAG00000029355	SUPT6H	82	38.792	Aotus_nancymaae
WBGene00001259	emb-5	83	38.291	ENSACLG00000005753	supt6h	85	37.789	Astatotilapia_calliptera
WBGene00001259	emb-5	87	38.158	ENSAMXG00000006025	supt6h	78	37.886	Astyanax_mexicanus
WBGene00001259	emb-5	87	38.529	ENSBTAG00000009036	SUPT6H	78	38.836	Bos_taurus
WBGene00001259	emb-5	87	38.210	ENSCJAG00000012982	SUPT6H	79	38.792	Callithrix_jacchus
WBGene00001259	emb-5	87	38.366	ENSCAFG00000018763	SUPT6H	78	38.719	Canis_familiaris
WBGene00001259	emb-5	87	38.366	ENSCAFG00020011752	SUPT6H	78	38.719	Canis_lupus_dingo
WBGene00001259	emb-5	87	38.529	ENSCHIG00000025101	SUPT6H	80	38.551	Capra_hircus
WBGene00001259	emb-5	87	38.439	ENSTSYG00000004539	SUPT6H	78	38.792	Carlito_syrichta
WBGene00001259	emb-5	66	32.636	ENSCAPG00000016785	SUPT6H	64	33.729	Cavia_aperea
WBGene00001259	emb-5	87	38.456	ENSCPOG00000001442	SUPT6H	78	38.808	Cavia_porcellus
WBGene00001259	emb-5	87	38.439	ENSCCAG00000031442	SUPT6H	80	38.792	Cebus_capucinus
WBGene00001259	emb-5	87	38.439	ENSCATG00000041242	SUPT6H	78	38.988	Cercocebus_atys
WBGene00001259	emb-5	87	38.227	ENSCLAG00000006422	SUPT6H	78	38.808	Chinchilla_lanigera
WBGene00001259	emb-5	68	40.741	ENSCSAG00000007178	SUPT6H	64	41.397	Chlorocebus_sabaeus
WBGene00001259	emb-5	87	37.988	ENSCPBG00000020288	SUPT6H	81	37.229	Chrysemys_picta_bellii
WBGene00001259	emb-5	87	38.439	ENSCANG00000026929	SUPT6H	80	38.792	Colobus_angolensis_palliatus
WBGene00001259	emb-5	87	38.081	ENSCGRG00000008708	Supt6	78	38.529	Cricetulus_griseus_crigri
WBGene00001259	emb-5	83	37.548	ENSCSEG00000018147	supt6h	84	37.836	Cynoglossus_semilaevis
WBGene00001259	emb-5	83	38.403	ENSCVAG00000021195	supt6h	84	38.774	Cyprinodon_variegatus
WBGene00001259	emb-5	86	37.445	ENSDARG00000006524	supt6h	77	37.647	Danio_rerio
WBGene00001259	emb-5	87	38.512	ENSDNOG00000019476	SUPT6H	78	38.865	Dasypus_novemcinctus
WBGene00001259	emb-5	89	35.091	FBgn0028982	Spt6	74	35.328	Drosophila_melanogaster
WBGene00001259	emb-5	87	38.439	ENSEASG00005009905	SUPT6H	80	38.792	Equus_asinus_asinus
WBGene00001259	emb-5	87	38.439	ENSECAG00000020521	SUPT6H	78	38.792	Equus_caballus
WBGene00001259	emb-5	63	37.447	ENSEEUG00000008265	-	55	38.723	Erinaceus_europaeus
WBGene00001259	emb-5	82	38.235	ENSELUG00000005639	supt6h	78	38.605	Esox_lucius
WBGene00001259	emb-5	83	37.528	ENSELUG00000022246	SUPT6H	84	37.194	Esox_lucius
WBGene00001259	emb-5	87	38.439	ENSFCAG00000004014	SUPT6H	78	38.792	Felis_catus
WBGene00001259	emb-5	87	38.579	ENSFALG00000006393	SUPT6H	79	38.789	Ficedula_albicollis
WBGene00001259	emb-5	87	38.220	ENSFDAG00000016453	SUPT6H	78	38.574	Fukomys_damarensis
WBGene00001259	emb-5	83	38.409	ENSFHEG00000004556	supt6h	77	37.554	Fundulus_heteroclitus
WBGene00001259	emb-5	82	37.886	ENSGMOG00000007109	supt6h	78	37.201	Gadus_morhua
WBGene00001259	emb-5	87	38.434	ENSGALG00000000146	SUPT6H	79	38.456	Gallus_gallus
WBGene00001259	emb-5	83	37.834	ENSGAFG00000000803	supt6h	85	37.581	Gambusia_affinis
WBGene00001259	emb-5	83	38.707	ENSGACG00000020513	supt6h	99	39.802	Gasterosteus_aculeatus
WBGene00001259	emb-5	87	38.061	ENSGAGG00000016728	SUPT6H	79	38.312	Gopherus_agassizii
WBGene00001259	emb-5	87	38.210	ENSGGOG00000016688	SUPT6H	79	38.792	Gorilla_gorilla
WBGene00001259	emb-5	83	38.291	ENSHBUG00000021694	supt6h	85	37.789	Haplochromis_burtoni
WBGene00001259	emb-5	87	38.276	ENSHGLG00000018764	SUPT6H	78	38.710	Heterocephalus_glaber_female
WBGene00001259	emb-5	87	38.276	ENSHGLG00100018216	SUPT6H	78	38.710	Heterocephalus_glaber_male
WBGene00001259	emb-5	83	38.095	ENSIPUG00000024533	supt6h	84	37.682	Ictalurus_punctatus
WBGene00001259	emb-5	87	38.355	ENSSTOG00000000577	SUPT6H	78	38.865	Ictidomys_tridecemlineatus
WBGene00001259	emb-5	87	38.439	ENSJJAG00000013309	Supt6	78	38.792	Jaculus_jaculus
WBGene00001259	emb-5	83	37.920	ENSKMAG00000019294	supt6h	77	37.348	Kryptolebias_marmoratus
WBGene00001259	emb-5	83	37.803	ENSLBEG00000027907	supt6h	79	37.518	Labrus_bergylta
WBGene00001259	emb-5	94	36.370	ENSLACG00000003186	SUPT6H	78	38.162	Latimeria_chalumnae
WBGene00001259	emb-5	87	38.585	ENSLAFG00000017945	SUPT6H	78	38.865	Loxodonta_africana
WBGene00001259	emb-5	87	38.439	ENSMFAG00000040784	SUPT6H	78	38.963	Macaca_fascicularis
WBGene00001259	emb-5	87	38.439	ENSMMUG00000004708	SUPT6H	78	38.792	Macaca_mulatta
WBGene00001259	emb-5	87	38.439	ENSMLEG00000030076	SUPT6H	80	38.792	Mandrillus_leucophaeus
WBGene00001259	emb-5	83	37.936	ENSMAMG00000020232	supt6h	81	37.599	Mastacembelus_armatus
WBGene00001259	emb-5	83	38.291	ENSMZEG00005024774	supt6h	85	37.789	Maylandia_zebra
WBGene00001259	emb-5	87	38.434	ENSMGAG00000005881	SUPT6H	79	38.456	Meleagris_gallopavo
WBGene00001259	emb-5	87	38.081	ENSMAUG00000012146	Supt6	78	38.529	Mesocricetus_auratus
WBGene00001259	emb-5	87	38.389	ENSMICG00000016884	SUPT6H	80	38.740	Microcebus_murinus
WBGene00001259	emb-5	87	38.154	ENSMOCG00000021959	Supt6	78	38.602	Microtus_ochrogaster
WBGene00001259	emb-5	83	38.164	ENSMMOG00000010942	supt6h	80	38.456	Mola_mola
WBGene00001259	emb-5	87	38.820	ENSMODG00000019291	SUPT6H	78	38.909	Monodelphis_domestica
WBGene00001259	emb-5	83	38.712	ENSMALG00000000093	supt6h	81	38.263	Monopterus_albus
WBGene00001259	emb-5	87	38.009	MGP_CAROLIEiJ_G0016796	Supt6	78	38.456	Mus_caroli
WBGene00001259	emb-5	87	38.009	ENSMUSG00000002052	Supt6	78	38.456	Mus_musculus
WBGene00001259	emb-5	87	36.919	MGP_PahariEiJ_G0017933	Supt6	78	37.336	Mus_pahari
WBGene00001259	emb-5	87	38.009	MGP_SPRETEiJ_G0017639	Supt6	78	38.456	Mus_spretus
WBGene00001259	emb-5	87	38.439	ENSMPUG00000014195	SUPT6H	78	38.792	Mustela_putorius_furo
WBGene00001259	emb-5	87	38.366	ENSMLUG00000012423	SUPT6H	78	38.747	Myotis_lucifugus
WBGene00001259	emb-5	87	38.439	ENSNGAG00000012801	Supt6	78	38.865	Nannospalax_galili
WBGene00001259	emb-5	83	38.139	ENSNBRG00000001035	supt6h	87	37.645	Neolamprologus_brichardi
WBGene00001259	emb-5	87	36.900	ENSNLEG00000002730	SUPT6H	80	37.482	Nomascus_leucogenys
WBGene00001259	emb-5	74	43.404	ENSMEUG00000009404	SUPT6H	65	43.404	Notamacropus_eugenii
WBGene00001259	emb-5	87	38.137	ENSOPRG00000012549	SUPT6H	78	38.719	Ochotona_princeps
WBGene00001259	emb-5	87	38.456	ENSODEG00000011930	SUPT6H	78	38.808	Octodon_degus
WBGene00001259	emb-5	83	37.983	ENSONIG00000005512	supt6h	79	37.428	Oreochromis_niloticus
WBGene00001259	emb-5	87	38.501	ENSOCUG00000000848	SUPT6H	78	38.534	Oryctolagus_cuniculus
WBGene00001259	emb-5	83	38.766	ENSORLG00000003098	supt6h	77	38.816	Oryzias_latipes
WBGene00001259	emb-5	83	38.712	ENSORLG00020016222	supt6h	77	38.112	Oryzias_latipes_hni
WBGene00001259	emb-5	83	38.561	ENSORLG00015021046	supt6h	77	38.040	Oryzias_latipes_hsok
WBGene00001259	emb-5	83	38.636	ENSOMEG00000010277	supt6h	73	38.609	Oryzias_melastigma
WBGene00001259	emb-5	87	36.727	ENSOGAG00000012089	SUPT6H	78	37.309	Otolemur_garnettii
WBGene00001259	emb-5	87	38.445	ENSOARG00000002727	SUPT6H	78	38.752	Ovis_aries
WBGene00001259	emb-5	87	38.439	ENSPPAG00000036720	SUPT6H	80	38.792	Pan_paniscus
WBGene00001259	emb-5	87	38.552	ENSPPRG00000024588	SUPT6H	78	38.860	Panthera_pardus
WBGene00001259	emb-5	87	38.171	ENSPTIG00000014860	SUPT6H	79	38.523	Panthera_tigris_altaica
WBGene00001259	emb-5	87	38.210	ENSPTRG00000008929	SUPT6H	79	38.792	Pan_troglodytes
WBGene00001259	emb-5	87	38.564	ENSPANG00000023444	SUPT6H	78	38.581	Papio_anubis
WBGene00001259	emb-5	87	37.799	ENSPKIG00000013468	supt6h	83	37.135	Paramormyrops_kingsleyae
WBGene00001259	emb-5	87	38.154	ENSPEMG00000009972	Supt6	78	38.602	Peromyscus_maniculatus_bairdii
WBGene00001259	emb-5	87	38.529	ENSPCIG00000017943	SUPT6H	78	38.836	Phascolarctos_cinereus
WBGene00001259	emb-5	83	37.860	ENSPFOG00000011171	supt6h	77	37.527	Poecilia_formosa
WBGene00001259	emb-5	83	37.957	ENSPLAG00000005137	supt6h	80	38.479	Poecilia_latipinna
WBGene00001259	emb-5	83	37.860	ENSPMEG00000013302	supt6h	77	37.464	Poecilia_mexicana
WBGene00001259	emb-5	83	37.860	ENSPREG00000009725	supt6h	77	37.464	Poecilia_reticulata
WBGene00001259	emb-5	83	42.472	ENSPPYG00000008105	SUPT6H	78	42.536	Pongo_abelii
WBGene00001259	emb-5	87	38.074	ENSPCOG00000021329	SUPT6H	78	38.165	Propithecus_coquereli
WBGene00001259	emb-5	83	38.186	ENSPNYG00000017271	supt6h	86	37.137	Pundamilia_nyererei
WBGene00001259	emb-5	87	38.326	ENSPNAG00000015154	supt6h	79	38.757	Pygocentrus_nattereri
WBGene00001259	emb-5	87	38.081	ENSRNOG00000012240	Supt6h	78	38.529	Rattus_norvegicus
WBGene00001259	emb-5	87	38.439	ENSRBIG00000015392	SUPT6H	80	38.792	Rhinopithecus_bieti
WBGene00001259	emb-5	87	38.439	ENSRROG00000035461	SUPT6H	80	38.792	Rhinopithecus_roxellana
WBGene00001259	emb-5	87	37.045	ENSSBOG00000028535	SUPT6H	79	37.627	Saimiri_boliviensis_boliviensis
WBGene00001259	emb-5	87	38.529	ENSSHAG00000014414	SUPT6H	84	38.836	Sarcophilus_harrisii
WBGene00001259	emb-5	88	37.743	ENSSFOG00015005320	supt6h	84	36.200	Scleropages_formosus
WBGene00001259	emb-5	83	38.654	ENSSMAG00000000771	supt6h	80	38.075	Scophthalmus_maximus
WBGene00001259	emb-5	83	38.316	ENSSDUG00000016786	supt6h	76	38.303	Seriola_dumerili
WBGene00001259	emb-5	83	37.889	ENSSLDG00000014842	supt6h	75	38.103	Seriola_lalandi_dorsalis
WBGene00001259	emb-5	87	37.482	ENSSARG00000006988	SUPT6H	78	37.836	Sorex_araneus
WBGene00001259	emb-5	87	38.196	ENSSPUG00000006119	SUPT6H	79	38.567	Sphenodon_punctatus
WBGene00001259	emb-5	83	38.520	ENSSPAG00000016590	supt6h	85	37.944	Stegastes_partitus
WBGene00001259	emb-5	87	38.439	ENSSSCG00000017773	SUPT6H	85	38.747	Sus_scrofa
WBGene00001259	emb-5	87	38.361	ENSTGUG00000006101	SUPT6H	79	38.572	Taeniopygia_guttata
WBGene00001259	emb-5	83	38.923	ENSTRUG00000014399	supt6h	78	38.373	Takifugu_rubripes
WBGene00001259	emb-5	83	38.579	ENSTNIG00000016157	supt6h	79	38.078	Tetraodon_nigroviridis
WBGene00001259	emb-5	86	35.089	ENSTBEG00000001874	SUPT6H	78	35.593	Tupaia_belangeri
WBGene00001259	emb-5	87	38.175	ENSTTRG00000004092	SUPT6H	78	38.383	Tursiops_truncatus
WBGene00001259	emb-5	87	38.439	ENSUAMG00000003188	SUPT6H	85	38.792	Ursus_americanus
WBGene00001259	emb-5	87	38.366	ENSUMAG00000011783	SUPT6H	78	38.719	Ursus_maritimus
WBGene00001259	emb-5	87	38.366	ENSVVUG00000017049	SUPT6H	78	38.719	Vulpes_vulpes
WBGene00001259	emb-5	83	37.443	ENSXETG00000019265	supt6h	78	36.747	Xenopus_tropicalis
WBGene00001259	emb-5	83	37.727	ENSXMAG00000014242	supt6h	80	38.168	Xiphophorus_maculatus