EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00001340 (Gene tree)
Gene ID: -
Gene Symbol: etr-1
Alias: -
Full Name: ELAV-Type RNA binding-protein family%3B ELAV-type RNA binding protein variant E
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 8255 bases
Position: chrII:162374-170628
Accession: A7KQE9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T01D1	RRM_1	PF00076.22	2.2e-51	1	3
T01D1	RRM_1	PF00076.22	2.2e-51	2	3
T01D1	RRM_1	PF00076.22	2.2e-51	3	3
T01D1	RRM_1	PF00076.22	2.2e-51	1	3
T01D1	RRM_1	PF00076.22	2.2e-51	2	3
T01D1	RRM_1	PF00076.22	2.2e-51	3	3
T01D1	RRM_1	PF00076.22	2.2e-51	1	3
T01D1	RRM_1	PF00076.22	2.2e-51	2	3
T01D1	RRM_1	PF00076.22	2.2e-51	3	3
T01D1	RRM_1	PF00076.22	2.2e-51	1	3
T01D1	RRM_1	PF00076.22	2.2e-51	2	3
T01D1	RRM_1	PF00076.22	2.2e-51	3	3
T01D1	RRM_1	PF00076.22	2.2e-51	1	3
T01D1	RRM_1	PF00076.22	2.2e-51	2	3
T01D1	RRM_1	PF00076.22	2.2e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	3.7e-51	1	3
T01D1	RRM_1	PF00076.22	3.7e-51	2	3
T01D1	RRM_1	PF00076.22	3.7e-51	3	3
T01D1	RRM_1	PF00076.22	4.9e-51	1	3
T01D1	RRM_1	PF00076.22	4.9e-51	2	3
T01D1	RRM_1	PF00076.22	4.9e-51	3	3
T01D1	RRM_1	PF00076.22	4.9e-51	1	3
T01D1	RRM_1	PF00076.22	4.9e-51	2	3
T01D1	RRM_1	PF00076.22	4.9e-51	3	3
T01D1	RRM_1	PF00076.22	4.9e-51	1	3
T01D1	RRM_1	PF00076.22	4.9e-51	2	3
T01D1	RRM_1	PF00076.22	4.9e-51	3	3
T01D1	RRM_1	PF00076.22	4.9e-51	1	3
T01D1	RRM_1	PF00076.22	4.9e-51	2	3
T01D1	RRM_1	PF00076.22	4.9e-51	3	3
T01D1	RRM_1	PF00076.22	4.9e-51	1	3
T01D1	RRM_1	PF00076.22	4.9e-51	2	3
T01D1	RRM_1	PF00076.22	4.9e-51	3	3
T01D1	RRM_1	PF00076.22	2.2e-36	1	2
T01D1	RRM_1	PF00076.22	2.2e-36	2	2
T01D1	RRM_1	PF00076.22	2.2e-36	1	2
T01D1	RRM_1	PF00076.22	2.2e-36	2	2
T01D1	RRM_1	PF00076.22	2.2e-36	1	2
T01D1	RRM_1	PF00076.22	2.2e-36	2	2
T01D1	RRM_1	PF00076.22	2.2e-36	1	2
T01D1	RRM_1	PF00076.22	2.2e-36	2	2
T01D1	RRM_1	PF00076.22	3.5e-36	1	2
T01D1	RRM_1	PF00076.22	3.5e-36	2	2
T01D1	RRM_1	PF00076.22	3.5e-36	1	2
T01D1	RRM_1	PF00076.22	3.5e-36	2	2
T01D1	RRM_1	PF00076.22	3.5e-36	1	2
T01D1	RRM_1	PF00076.22	3.5e-36	2	2
T01D1	RRM_1	PF00076.22	3.5e-36	1	2
T01D1	RRM_1	PF00076.22	3.5e-36	2	2
T01D1	RRM_1	PF00076.22	3.6e-36	1	2
T01D1	RRM_1	PF00076.22	3.6e-36	2	2
T01D1	RRM_1	PF00076.22	3.6e-36	1	2
T01D1	RRM_1	PF00076.22	3.6e-36	2	2
T01D1	RRM_1	PF00076.22	3.6e-36	1	2
T01D1	RRM_1	PF00076.22	3.6e-36	2	2
T01D1	RRM_1	PF00076.22	3.6e-36	1	2
T01D1	RRM_1	PF00076.22	3.6e-36	2	2
T01D1	RRM_1	PF00076.22	9.2e-18	1	1
T01D1	RRM_1	PF00076.22	9.2e-18	1	1
T01D1	RRM_1	PF00076.22	9.2e-18	1	1
T01D1	RRM_1	PF00076.22	9.2e-18	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	1.6e-17	1	1
T01D1	RRM_1	PF00076.22	2.1e-17	1	1
T01D1	RRM_1	PF00076.22	2.1e-17	1	1
T01D1	RRM_1	PF00076.22	2.1e-17	1	1
T01D1	RRM_1	PF00076.22	2.1e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.3e-17	1	1
T01D1	RRM_1	PF00076.22	2.4e-17	1	1
T01D1	RRM_1	PF00076.22	2.4e-17	1	1
T01D1	RRM_1	PF00076.22	2.4e-17	1	1
T01D1	RRM_1	PF00076.22	2.4e-17	1	1
T01D1	RRM_1	PF00076.22	2.4e-17	1	1
T01D1	RRM_1	PF00076.22	2.8e-17	1	1
T01D1	RRM_1	PF00076.22	2.8e-17	1	1
T01D1	RRM_1	PF00076.22	2.8e-17	1	1
T01D1	RRM_1	PF00076.22	2.8e-17	1	1
T01D1	RRM_1	PF00076.22	2.9e-17	1	1
T01D1	RRM_1	PF00076.22	2.9e-17	1	1
T01D1	RRM_1	PF00076.22	2.9e-17	1	1
T01D1	RRM_1	PF00076.22	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T01D1.2b.1	-	2148	-	T01D1.2b.1	352 (aa)	NP_001022295	A8DYR9
T01D1.2s.3	-	1890	-	T01D1.2s.3	356 (aa)	NP_001300583	A0A0K3ARP5
T01D1.2s.2	-	1832	-	T01D1.2s.2	356 (aa)	NP_001300583	A0A0K3ARP5
T01D1.2s.1	-	2155	-	T01D1.2s.1	356 (aa)	NP_001300583	A0A0K3ARP5
T01D1.2w.4	-	1059	NM_001313658	T01D1.2w.4	278 (aa)	NP_001300587	A0A0K3AX15
T01D1.2v.4	-	1051	NM_001313657	T01D1.2v.4	280 (aa)	NP_001300586	A0A0K3AUQ1
T01D1.2u.2	-	1607	-	T01D1.2u.2	281 (aa)	NP_001300585	A0A0K3AR42
T01D1.2t.4	-	1898	-	T01D1.2t.4	354 (aa)	NP_001300584	A0A0K3AU17
T01D1.2a.5	-	2045	NM_061272	T01D1.2a.5	584 (aa)	NP_493673	G5EF03
T01D1.2u.3	-	1665	-	T01D1.2u.3	281 (aa)	NP_001300585	A0A0K3AR42
T01D1.2s.4	-	1904	-	T01D1.2s.4	356 (aa)	NP_001300583	A0A0K3ARP5
T01D1.2t.1	-	2149	-	T01D1.2t.1	354 (aa)	NP_001300584	A0A0K3AU17
T01D1.2t.2	-	1826	-	T01D1.2t.2	354 (aa)	NP_001300584	A0A0K3AU17
T01D1.2t.3	-	1884	-	T01D1.2t.3	354 (aa)	NP_001300584	A0A0K3AU17
T01D1.2l.4	-	2034	NM_001313647	T01D1.2l.4	589 (aa)	NP_001300576	A0A0K3AUP0
T01D1.2l.5	-	2048	NM_001313647	T01D1.2l.5	589 (aa)	NP_001300576	A0A0K3AUP0
T01D1.2m.3	-	1792	NM_001313648	T01D1.2m.3	464 (aa)	NP_001300577	A0A0K3AX05
T01D1.2m.2	-	1734	NM_001313648	T01D1.2m.2	464 (aa)	NP_001300577	A0A0K3AX05
T01D1.2p.2	-	1654	NM_001313651	T01D1.2p.2	422 (aa)	NP_001300580	A0A0K3AR37
T01D1.2l.1	-	2194	NM_001313647	T01D1.2l.1	589 (aa)	NP_001300576	A0A0K3AUP0
T01D1.2l.2	-	2299	NM_001313647	T01D1.2l.2	589 (aa)	NP_001300576	A0A0K3AUP0
T01D1.2l.3	-	1976	NM_001313647	T01D1.2l.3	589 (aa)	NP_001300576	A0A0K3AUP0
T01D1.2w.3	-	1045	NM_001313658	T01D1.2w.3	278 (aa)	NP_001300587	A0A0K3AX15
T01D1.2x.1	-	1124	-	T01D1.2x.1	205 (aa)	-	A0A0K3ARQ0
T01D1.2x.2	-	872	NM_001313659	T01D1.2x.2	205 (aa)	NP_001300588	A0A0K3ARQ0
T01D1.2r.1	-	1752	-	T01D1.2r.1	347 (aa)	-	A0A0K3AX10
T01D1.2v.2	-	2003	-	T01D1.2v.2	280 (aa)	-	A0A0K3AUQ1
T01D1.2v.3	-	993	NM_001313657	T01D1.2v.3	280 (aa)	NP_001300586	A0A0K3AUQ1
T01D1.2v.1	-	2255	-	T01D1.2v.1	280 (aa)	-	A0A0K3AUQ1
T01D1.2g.1	-	1967	NM_001129160	T01D1.2g.1	513 (aa)	NP_001122632	A7KQE9
T01D1.2m.4	-	1806	NM_001313648	T01D1.2m.4	464 (aa)	NP_001300577	A0A0K3AX05
T01D1.2r.4	-	1502	-	T01D1.2r.4	347 (aa)	-	A0A0K3AX10
T01D1.2u.1	-	1930	-	T01D1.2u.1	281 (aa)	NP_001300585	A0A0K3AR42
T01D1.2p.1	-	1977	-	T01D1.2p.1	422 (aa)	-	A0A0K3AR37
T01D1.2p.3	-	1712	NM_001313651	T01D1.2p.3	422 (aa)	NP_001300580	A0A0K3AR37
T01D1.2o.1	-	1832	-	T01D1.2o.1	389 (aa)	-	A0A0K3AU13
T01D1.2w.2	-	987	NM_001313658	T01D1.2w.2	278 (aa)	NP_001300587	A0A0K3AX15
T01D1.2r.2	-	1429	NM_001313653	T01D1.2r.2	347 (aa)	NP_001300582	A0A0K3AX10
T01D1.2d.4	-	1872	NM_001129157	T01D1.2d.4	535 (aa)	NP_001122629	A8DYS3
T01D1.2c	-	2283	NR_132573	-	- (aa)	-	-
T01D1.2d.5	-	1886	NM_001129157	T01D1.2d.5	535 (aa)	NP_001122629	A8DYS3
T01D1.2o.3	-	1567	NM_001313650	T01D1.2o.3	389 (aa)	NP_001300579	A0A0K3AU13
T01D1.2o.2	-	1509	NM_001313650	T01D1.2o.2	389 (aa)	NP_001300579	A0A0K3AU13
T01D1.2n.4	-	1800	NM_001313649	T01D1.2n.4	462 (aa)	NP_001300578	A0A0K3ARP1
T01D1.2g.4	-	1806	NM_001129160	T01D1.2g.4	513 (aa)	NP_001122632	A7KQE9
T01D1.2n.2	-	1728	NM_001313649	T01D1.2n.2	462 (aa)	NP_001300578	A0A0K3ARP1
T01D1.2n.3	-	1786	NM_001313649	T01D1.2n.3	462 (aa)	NP_001300578	A0A0K3ARP1
T01D1.2x.4	-	839	NM_001313659	T01D1.2x.4	205 (aa)	NP_001300588	A0A0K3ARQ0
T01D1.2n.1	-	2051	-	T01D1.2n.1	462 (aa)	-	A0A0K3ARP1
T01D1.2r.3	-	1487	NM_001313653	T01D1.2r.3	347 (aa)	NP_001300582	A0A0K3AX10
T01D1.2q.4	-	1720	NM_001313652	T01D1.2q.4	420 (aa)	NP_001300581	A0A0K3AUP5
T01D1.2x.3	-	781	NM_001313659	T01D1.2x.3	205 (aa)	NP_001300588	A0A0K3ARQ0
T01D1.2q.1	-	1971	-	T01D1.2q.1	420 (aa)	-	A0A0K3AUP5
T01D1.2q.3	-	1706	NM_001313652	T01D1.2q.3	420 (aa)	NP_001300581	A0A0K3AUP5
T01D1.2q.2	-	1648	NM_001313652	T01D1.2q.2	420 (aa)	NP_001300581	A0A0K3AUP5
T01D1.2p.4	-	1726	NM_001313651	T01D1.2p.4	422 (aa)	NP_001300580	A0A0K3AR37
T01D1.2e.5	-	2039	NM_001129158	T01D1.2e.5	586 (aa)	NP_001122630	A8DYS1
T01D1.2o.4	-	1582	NM_001313650	T01D1.2o.4	389 (aa)	NP_001300579	A0A0K3AU13
T01D1.2d.2	-	2137	NM_001129157	T01D1.2d.2	535 (aa)	NP_001122629	A8DYS3
T01D1.2m.1	-	2057	-	T01D1.2m.1	464 (aa)	-	A0A0K3AX05
T01D1.2e.4	-	2025	NM_001129158	T01D1.2e.4	586 (aa)	NP_001122630	A8DYS1
T01D1.2e.1	-	2185	NM_001129158	T01D1.2e.1	586 (aa)	NP_001122630	A8DYS1
T01D1.2a.4	-	2019	NM_061272	T01D1.2a.4	584 (aa)	NP_493673	G5EF03
T01D1.2e.3	-	1967	NM_001129158	T01D1.2e.3	586 (aa)	NP_001122630	A8DYS1
T01D1.2e.2	-	2290	NM_001129158	T01D1.2e.2	586 (aa)	NP_001122630	A8DYS1
T01D1.2a.1	-	2191	NM_061272	T01D1.2a.1	584 (aa)	NP_493673	G5EF03
T01D1.2d.1	-	2032	NM_001129157	T01D1.2d.1	535 (aa)	NP_001122629	A8DYS3
T01D1.2a.3	-	1961	NM_061272	T01D1.2a.3	584 (aa)	NP_493673	G5EF03
T01D1.2a.2	-	2284	NM_061272	T01D1.2a.2	584 (aa)	NP_493673	G5EF03
T01D1.2b.2	-	1825	-	T01D1.2b.2	352 (aa)	NP_001022295	A8DYR9
T01D1.2b.3	-	1883	-	T01D1.2b.3	352 (aa)	NP_001022295	A8DYR9
T01D1.2d.3	-	1814	NM_001129157	T01D1.2d.3	535 (aa)	NP_001122629	A8DYS3
T01D1.2b.4	-	1898	-	T01D1.2b.4	352 (aa)	NP_001022295	A8DYR9
T01D1.2b.5	-	1893	-	T01D1.2b.5	352 (aa)	NP_001022295	A8DYR9
T01D1.2g.3	-	1748	NM_001129160	T01D1.2g.3	513 (aa)	NP_001122632	A7KQE9
T01D1.2g.2	-	2071	NM_001129160	T01D1.2g.2	513 (aa)	NP_001122632	A7KQE9
T01D1.2f.4	-	2031	NM_001129159	T01D1.2f.4	588 (aa)	NP_001122631	A8DYS0
T01D1.2f.5	-	2045	NM_001129159	T01D1.2f.5	588 (aa)	NP_001122631	A8DYS0
T01D1.2f.2	-	2296	NM_001129159	T01D1.2f.2	588 (aa)	NP_001122631	A8DYS0
T01D1.2f.3	-	1973	NM_001129159	T01D1.2f.3	588 (aa)	NP_001122631	A8DYS0
T01D1.2g.5	-	1821	NM_001129160	T01D1.2g.5	513 (aa)	NP_001122632	A7KQE9
T01D1.2f.1	-	2191	NM_001129159	T01D1.2f.1	588 (aa)	NP_001122631	A8DYS0
T01D1.2w.1	-	1310	-	T01D1.2w.1	278 (aa)	-	A0A0K3AX15
T01D1.2u.4	-	1680	-	T01D1.2u.4	281 (aa)	NP_001300585	A0A0K3AR42

Gene Model

Click here to download WBGene00001340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001340	etr-1	54	35.135	WBGene00015943	tiar-1	60	35.135
WBGene00001340	etr-1	56	36.923	WBGene00001368	exc-7	96	35.714
WBGene00001340	etr-1	77	68.367	WBGene00006807	unc-75	100	39.261
WBGene00001340	etr-1	50	40.476	WBGene00003902	pab-1	61	40.476
WBGene00001340	etr-1	53	42.857	WBGene00003903	pab-2	52	42.857
WBGene00001340	etr-1	78	36.364	WBGene00007396	tiar-3	52	37.647
WBGene00001340	etr-1	63	33.333	WBGene00006331	sup-26	61	33.333